Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRIT1Q9P2V4 Z98885.3-201ENST00000624882 1757 ntBASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 GRK6P1-201ENST00000400595 1711 ntBASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 CYP4F36P-201ENST00000589193 186 ntBASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 AC073869.4-201ENST00000620841 800 ntBASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 AC092115.1-201ENST00000566277 1402 ntBASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 MST1P2-201ENST00000457982 2291 ntBASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LRIT1Q9P2V4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 AL928654.5-201ENST00000624831 2501 ntBASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 AC092903.1-201ENST00000466506 262 ntBASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 AC026470.1-201ENST00000478038 846 ntBASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 CSTP2-201ENST00000610599 398 ntBASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRIT1Q9P2V4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms