Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC010503.4-201ENST00000615487 688 ntBASIC12.27□□□□□ -0.45
AP3S1Q92572 AC008761.3-201ENST00000624803 892 ntBASIC12.27□□□□□ -0.45
AP3S1Q92572 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.27□□□□□ -0.45
AP3S1Q92572 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S1Q92572 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S1Q92572 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S1Q92572 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S1Q92572 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S1Q92572 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
AP3S1Q92572 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S1Q92572 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S1Q92572 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 MIR1224-201ENST00000408193 85 ntBASIC12.26□□□□□ -0.45
AP3S1Q92572 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.26□□□□□ -0.45
AP3S1Q92572 MYCLP2-201ENST00000449268 967 ntBASIC12.26□□□□□ -0.45
AP3S1Q92572 KLF2P3-201ENST00000451977 1087 ntBASIC12.26□□□□□ -0.45
AP3S1Q92572 AC009477.1-201ENST00000452936 217 ntBASIC12.26□□□□□ -0.45
AP3S1Q92572 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.26□□□□□ -0.45
AP3S1Q92572 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.26□□□□□ -0.45
AP3S1Q92572 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S1Q92572 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.26□□□□□ -0.45
AP3S1Q92572 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.26□□□□□ -0.45
AP3S1Q92572 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.26□□□□□ -0.45
AP3S1Q92572 RN7SL48P-201ENST00000579283 293 ntBASIC12.26□□□□□ -0.45
AP3S1Q92572 AL132642.2-201ENST00000623423 1998 ntBASIC12.26□□□□□ -0.45
AP3S1Q92572 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
AP3S1Q92572 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
AP3S1Q92572 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AP3S1Q92572 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S1Q92572 AL139158.3-201ENST00000641212 1562 ntBASIC12.26□□□□□ -0.45
AP3S1Q92572 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S1Q92572 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AP3S1Q92572 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.25□□□□□ -0.45
AP3S1Q92572 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
AP3S1Q92572 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
AP3S1Q92572 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 AC015818.9-201ENST00000591705 4582 ntBASIC12.25□□□□□ -0.45
AP3S1Q92572 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms