RNA–Protein interactions for RNA: ENST00000527424.5

RNF170-206, Transcript of ring finger protein 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF170, Length 3,880 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-206ENST00000527424 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
RNF170-206ENST00000527424 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
RNF170-206ENST00000527424 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.14
RNF170-206ENST00000527424 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
RNF170-206ENST00000527424 PCGF6Q9BYE7 350 aa21.14■□□□□ 0.97
RNF170-206ENST00000527424 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
RNF170-206ENST00000527424 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
RNF170-206ENST00000527424 HRCP23327 699 aa20.78■□□□□ 0.92
RNF170-206ENST00000527424 LOC105371045A0A1W2PR82 267 aa20.7■□□□□ 0.9
RNF170-206ENST00000527424 FAM9AQ8IZU1 332 aaPredicted RBP20.66■□□□□ 0.9
RNF170-206ENST00000527424 PPARGC1BQ86YN6 1023 aaKnown RBP20.63■□□□□ 0.89
RNF170-206ENST00000527424 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
RNF170-206ENST00000527424 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
RNF170-206ENST00000527424 TRIM41Q8WV44 630 aa20.39■□□□□ 0.86
RNF170-206ENST00000527424 TRIM26Q12899 539 aaPredicted RBP20.29■□□□□ 0.84
RNF170-206ENST00000527424 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
RNF170-206ENST00000527424 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
RNF170-206ENST00000527424 CCDC180Q9P1Z9 1646 aa19.99■□□□□ 0.79
RNF170-206ENST00000527424 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
RNF170-206ENST00000527424 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
RNF170-206ENST00000527424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.75■□□□□ 0.75
RNF170-206ENST00000527424 UBTFP17480 764 aaKnown RBP19.66■□□□□ 0.74
RNF170-206ENST00000527424 RANGAP1P46060 587 aaPredicted RBP19.65■□□□□ 0.74
RNF170-206ENST00000527424 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
RNF170-206ENST00000527424 ABCC9O60706 1549 aa19.59■□□□□ 0.73
RNF170-206ENST00000527424 RSF1Q96T23 1441 aaPredicted RBP19.56■□□□□ 0.72
RNF170-206ENST00000527424 CENPBP07199 599 aaPredicted RBP19.5■□□□□ 0.71
RNF170-206ENST00000527424 APLP2Q06481 763 aa19.49■□□□□ 0.71
RNF170-206ENST00000527424 YTHDC1Q96MU7 727 aaKnown RBP19.49■□□□□ 0.71
RNF170-206ENST00000527424 PELP1Q8IZL8 1130 aaKnown RBP19.46■□□□□ 0.71
RNF170-206ENST00000527424 DIEXFQ68CQ4 756 aaKnown RBP19.4■□□□□ 0.7
RNF170-206ENST00000527424 HNRNPUL2Q1KMD3 747 aaKnown RBP19.37■□□□□ 0.69
RNF170-206ENST00000527424 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
RNF170-206ENST00000527424 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
RNF170-206ENST00000527424 CECR2Q9BXF3 1484 aa19.24■□□□□ 0.67
RNF170-206ENST00000527424 PABPN1Q86U42 306 aaKnown RBP eCLIP19.23■□□□□ 0.67
RNF170-206ENST00000527424 GTF3C3Q9Y5Q9 886 aa19.23■□□□□ 0.67
RNF170-206ENST00000527424 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
RNF170-206ENST00000527424 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
RNF170-206ENST00000527424 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
RNF170-206ENST00000527424 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
RNF170-206ENST00000527424 ZNF316A6NFI3 1004 aaPredicted RBP19.03■□□□□ 0.64
RNF170-206ENST00000527424 ITGAEP38570 1179 aa19.01■□□□□ 0.63
RNF170-206ENST00000527424 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
RNF170-206ENST00000527424 CEP162Q5TB80 1403 aa18.92■□□□□ 0.62
RNF170-206ENST00000527424 WIZO95785 1651 aa18.85■□□□□ 0.61
RNF170-206ENST00000527424 SOGA1O94964 1423 aa18.85■□□□□ 0.61
RNF170-206ENST00000527424 NACADO15069 1562 aa18.85■□□□□ 0.61
RNF170-206ENST00000527424 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
RNF170-206ENST00000527424 CCDC88BA6NC98 1476 aa18.81■□□□□ 0.6
RNF170-206ENST00000527424 MIER1Q8N108 512 aa18.81■□□□□ 0.6
RNF170-206ENST00000527424 TNIKQ9UKE5 1360 aa18.75■□□□□ 0.59
RNF170-206ENST00000527424 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
RNF170-206ENST00000527424 CLIP1P30622 1438 aa18.66■□□□□ 0.58
RNF170-206ENST00000527424 GOLGA3Q08378 1498 aa18.63■□□□□ 0.57
RNF170-206ENST00000527424 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
RNF170-206ENST00000527424 RUSC2Q8N2Y8 1516 aa18.62■□□□□ 0.57
RNF170-206ENST00000527424 EEA1Q15075 1411 aa18.59■□□□□ 0.57
RNF170-206ENST00000527424 MYT1Q01538 1121 aa18.58■□□□□ 0.56
RNF170-206ENST00000527424 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
RNF170-206ENST00000527424 BCANQ96GW7 911 aa18.53■□□□□ 0.56
RNF170-206ENST00000527424 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
RNF170-206ENST00000527424 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
RNF170-206ENST00000527424 NEFLP07196 543 aa18.47■□□□□ 0.55
RNF170-206ENST00000527424 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
RNF170-206ENST00000527424 KANK4Q5T7N3 995 aaPredicted RBP18.36■□□□□ 0.53
RNF170-206ENST00000527424 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
RNF170-206ENST00000527424 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
RNF170-206ENST00000527424 DDX10Q13206 875 aaKnown RBP18.35■□□□□ 0.53
RNF170-206ENST00000527424 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
RNF170-206ENST00000527424 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.53
RNF170-206ENST00000527424 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
RNF170-206ENST00000527424 RAPGEF2Q9Y4G8 1499 aa18.29■□□□□ 0.52
RNF170-206ENST00000527424 CNGB1Q14028 1251 aaPredicted RBP18.26■□□□□ 0.51
RNF170-206ENST00000527424 FKBP8Q14318 412 aa18.23■□□□□ 0.51
RNF170-206ENST00000527424 ANP32CO43423 234 aa18.21■□□□□ 0.5
RNF170-206ENST00000527424 TRIM52Q96A61 297 aa18.2■□□□□ 0.5
RNF170-206ENST00000527424 SIN3AQ96ST3 1273 aa18.19■□□□□ 0.5
RNF170-206ENST00000527424 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
RNF170-206ENST00000527424 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
RNF170-206ENST00000527424 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
RNF170-206ENST00000527424 POLR3GLQ9BT43 218 aa18.13■□□□□ 0.49
RNF170-206ENST00000527424 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
RNF170-206ENST00000527424 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
RNF170-206ENST00000527424 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
RNF170-206ENST00000527424 KCNH8Q96L42 1107 aa18.11■□□□□ 0.49
RNF170-206ENST00000527424 ARID3CA6NKF2 412 aa18.1■□□□□ 0.49
RNF170-206ENST00000527424 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
RNF170-206ENST00000527424 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
RNF170-206ENST00000527424 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
RNF170-206ENST00000527424 KIF21BO75037 1637 aa18.01■□□□□ 0.47
RNF170-206ENST00000527424 RAB3GAP2Q9H2M9 1393 aa18■□□□□ 0.47
RNF170-206ENST00000527424 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
RNF170-206ENST00000527424 CHIC2Q9UKJ5 165 aa17.99■□□□□ 0.47
RNF170-206ENST00000527424 IRX6P78412 446 aaPredicted RBP17.98■□□□□ 0.47
RNF170-206ENST00000527424 HNRNPUQ00839 825 aaKnown RBP eCLIP17.98■□□□□ 0.47
RNF170-206ENST00000527424 CUX2O14529 1486 aa17.95■□□□□ 0.46
RNF170-206ENST00000527424 CARMIL1Q5VZK9 1371 aa17.92■□□□□ 0.46
RNF170-206ENST00000527424 TSHZ2Q9NRE2 1034 aa17.91■□□□□ 0.46
RNF170-206ENST00000527424 ZNF326Q5BKZ1 582 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms