RNA–Protein interactions for RNA: ENST00000300850.5

ZNF646-201, Transcript of zinc finger protein 646, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZNF646, Length 6,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF646-201ENST00000300850 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
ZNF646-201ENST00000300850 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
ZNF646-201ENST00000300850 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
ZNF646-201ENST00000300850 SHROOM4Q9ULL8 1493 aa20.1■□□□□ 0.81
ZNF646-201ENST00000300850 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
ZNF646-201ENST00000300850 APLP2Q06481 763 aa19.51■□□□□ 0.71
ZNF646-201ENST00000300850 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
ZNF646-201ENST00000300850 PELP1Q8IZL8 1130 aaKnown RBP19.46■□□□□ 0.71
ZNF646-201ENST00000300850 FAM9AQ8IZU1 332 aaPredicted RBP19.42■□□□□ 0.7
ZNF646-201ENST00000300850 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
ZNF646-201ENST00000300850 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
ZNF646-201ENST00000300850 ATP1B4Q9UN42 357 aaPredicted RBP19.06■□□□□ 0.64
ZNF646-201ENST00000300850 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
ZNF646-201ENST00000300850 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.61
ZNF646-201ENST00000300850 TRIM41Q8WV44 630 aa18.83■□□□□ 0.6
ZNF646-201ENST00000300850 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
ZNF646-201ENST00000300850 CENPBP07199 599 aaPredicted RBP18.72■□□□□ 0.59
ZNF646-201ENST00000300850 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
ZNF646-201ENST00000300850 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
ZNF646-201ENST00000300850 ZEB1P37275 1124 aaPredicted RBP18.58■□□□□ 0.57
ZNF646-201ENST00000300850 NEFLP07196 543 aa18.46■□□□□ 0.55
ZNF646-201ENST00000300850 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
ZNF646-201ENST00000300850 ITGAEP38570 1179 aa18.33■□□□□ 0.52
ZNF646-201ENST00000300850 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
ZNF646-201ENST00000300850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
ZNF646-201ENST00000300850 HNRNPUL2Q1KMD3 747 aaKnown RBP18.3■□□□□ 0.52
ZNF646-201ENST00000300850 CNGB1Q14028 1251 aaPredicted RBP18.23■□□□□ 0.51
ZNF646-201ENST00000300850 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
ZNF646-201ENST00000300850 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.49
ZNF646-201ENST00000300850 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
ZNF646-201ENST00000300850 MYT1Q01538 1121 aa18.03■□□□□ 0.48
ZNF646-201ENST00000300850 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
ZNF646-201ENST00000300850 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
ZNF646-201ENST00000300850 HRCP23327 699 aa17.92■□□□□ 0.46
ZNF646-201ENST00000300850 FAM50AQ14320 339 aaKnown RBP17.76■□□□□ 0.43
ZNF646-201ENST00000300850 CLSPNQ9HAW4 1339 aa17.71■□□□□ 0.43
ZNF646-201ENST00000300850 TRIM52Q96A61 297 aa17.69■□□□□ 0.42
ZNF646-201ENST00000300850 NEUROD1Q13562 356 aa17.65■□□□□ 0.42
ZNF646-201ENST00000300850 ZNF316A6NFI3 1004 aaPredicted RBP17.65■□□□□ 0.42
ZNF646-201ENST00000300850 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
ZNF646-201ENST00000300850 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
ZNF646-201ENST00000300850 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
ZNF646-201ENST00000300850 FBLN2P98095 1184 aa17.52■□□□□ 0.39
ZNF646-201ENST00000300850 RTL5Q5HYW3 569 aaPredicted RBP17.51■□□□□ 0.39
ZNF646-201ENST00000300850 BCANQ96GW7 911 aa17.5■□□□□ 0.39
ZNF646-201ENST00000300850 BCL11AQ9H165 835 aa17.48■□□□□ 0.39
ZNF646-201ENST00000300850 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
ZNF646-201ENST00000300850 ABCC9O60706 1549 aa17.46■□□□□ 0.39
ZNF646-201ENST00000300850 ARID3CA6NKF2 412 aa17.41■□□□□ 0.38
ZNF646-201ENST00000300850 ANP32CO43423 234 aa17.34■□□□□ 0.37
ZNF646-201ENST00000300850 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
ZNF646-201ENST00000300850 P3H3Q8IVL6 736 aa17.33■□□□□ 0.36
ZNF646-201ENST00000300850 CANXP27824 592 aaKnown RBP17.29■□□□□ 0.36
ZNF646-201ENST00000300850 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
ZNF646-201ENST00000300850 ZNF777Q9ULD5 760 aaPredicted RBP17.22■□□□□ 0.35
ZNF646-201ENST00000300850 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
ZNF646-201ENST00000300850 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
ZNF646-201ENST00000300850 NEFMP07197 916 aa17.15■□□□□ 0.34
ZNF646-201ENST00000300850 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
ZNF646-201ENST00000300850 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
ZNF646-201ENST00000300850 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
ZNF646-201ENST00000300850 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
ZNF646-201ENST00000300850 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
ZNF646-201ENST00000300850 ANP32AP39687 249 aaKnown RBP16.93■□□□□ 0.3
ZNF646-201ENST00000300850 SALL2Q9Y467 1007 aaPredicted RBP16.92■□□□□ 0.3
ZNF646-201ENST00000300850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
ZNF646-201ENST00000300850 FAM9BQ8IZU0 186 aa16.86■□□□□ 0.29
ZNF646-201ENST00000300850 FKBP8Q14318 412 aa16.84■□□□□ 0.29
ZNF646-201ENST00000300850 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
ZNF646-201ENST00000300850 CHIC2Q9UKJ5 165 aa16.84■□□□□ 0.29
ZNF646-201ENST00000300850 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.29
ZNF646-201ENST00000300850 HSP90AA1P07900 732 aaKnown RBP16.83■□□□□ 0.28
ZNF646-201ENST00000300850 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
ZNF646-201ENST00000300850 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
ZNF646-201ENST00000300850 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
ZNF646-201ENST00000300850 DDX10Q13206 875 aaKnown RBP16.8■□□□□ 0.28
ZNF646-201ENST00000300850 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
ZNF646-201ENST00000300850 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
ZNF646-201ENST00000300850 KDM2AQ9Y2K7 1162 aa16.74■□□□□ 0.27
ZNF646-201ENST00000300850 PLEKHG5O94827 1062 aa16.74■□□□□ 0.27
ZNF646-201ENST00000300850 ANP32BQ92688 251 aaKnown RBP16.71■□□□□ 0.27
ZNF646-201ENST00000300850 A0A0G2JS52 829 aa16.71■□□□□ 0.27
ZNF646-201ENST00000300850 UPF2Q9HAU5 1272 aaKnown RBP16.7■□□□□ 0.26
ZNF646-201ENST00000300850 ZBTB7CA1YPR0 619 aa16.68■□□□□ 0.26
ZNF646-201ENST00000300850 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
ZNF646-201ENST00000300850 ARXQ96QS3 562 aa16.67■□□□□ 0.26
ZNF646-201ENST00000300850 EIF5BO60841 1220 aaKnown RBP16.66■□□□□ 0.26
ZNF646-201ENST00000300850 WDR43Q15061 677 aaKnown RBP eCLIP16.65■□□□□ 0.26
ZNF646-201ENST00000300850 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
ZNF646-201ENST00000300850 NBR1Q14596 966 aa16.61■□□□□ 0.25
ZNF646-201ENST00000300850 CCDC136Q96JN2 1154 aa16.61■□□□□ 0.25
ZNF646-201ENST00000300850 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
ZNF646-201ENST00000300850 C14orf37Q86TY3 774 aa16.58■□□□□ 0.24
ZNF646-201ENST00000300850 TSPY4P0CV99 314 aa16.58■□□□□ 0.24
ZNF646-201ENST00000300850 TSPY10P0CW01 314 aa16.58■□□□□ 0.24
ZNF646-201ENST00000300850 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
ZNF646-201ENST00000300850 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
ZNF646-201ENST00000300850 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
ZNF646-201ENST00000300850 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
ZNF646-201ENST00000300850 MTUS2Q5JR59 1369 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms