Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 CDIPT-AS1-203ENST00000638164 713 ntBASIC16.16■□□□□ 0.18
CNTNAP1P78357 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 AC020763.3-201ENST00000625095 2904 ntBASIC16.16■□□□□ 0.18
CNTNAP1P78357 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CNTNAP1P78357 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNTNAP1P78357 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 RPS6-201ENST00000315377 863 ntTSL 3 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 FTLP3-201ENST00000427242 528 ntBASIC16.15■□□□□ 0.18
CNTNAP1P78357 AK2P2-201ENST00000439142 405 ntBASIC16.15■□□□□ 0.18
CNTNAP1P78357 CHCHD2P6-201ENST00000454346 447 ntBASIC16.15■□□□□ 0.18
CNTNAP1P78357 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 RN7SL47P-201ENST00000488710 299 ntBASIC16.15■□□□□ 0.18
CNTNAP1P78357 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 PMM2-216ENST00000569958 698 ntTSL 2 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC16.15■□□□□ 0.18
CNTNAP1P78357 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC16.15■□□□□ 0.18
CNTNAP1P78357 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 AC091905.3-201ENST00000624959 234 ntBASIC16.15■□□□□ 0.18
CNTNAP1P78357 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CNTNAP1P78357 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNTNAP1P78357 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 AC012513.2-201ENST00000441511 1137 ntBASIC16.14■□□□□ 0.17
CNTNAP1P78357 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNTNAP1P78357 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CNTNAP1P78357 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms