Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-2O95096 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-2O95096 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.8□□□□□ -0.36
NKX2-2O95096 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.8□□□□□ -0.36
NKX2-2O95096 ERP29P1-201ENST00000442902 706 ntBASIC12.8□□□□□ -0.36
NKX2-2O95096 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.8□□□□□ -0.36
NKX2-2O95096 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 AC138701.2-201ENST00000553634 226 ntBASIC12.8□□□□□ -0.36
NKX2-2O95096 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.8□□□□□ -0.36
NKX2-2O95096 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.8□□□□□ -0.36
NKX2-2O95096 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 AC012073.1-201ENST00000606114 1108 ntBASIC12.8□□□□□ -0.36
NKX2-2O95096 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.8□□□□□ -0.36
NKX2-2O95096 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 DMBT1P1-203ENST00000636837 4628 ntBASIC12.8□□□□□ -0.36
NKX2-2O95096 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
NKX2-2O95096 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-2O95096 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-2O95096 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 MIR497HG-202ENST00000572453 3838 ntBASIC12.8□□□□□ -0.36
NKX2-2O95096 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-2O95096 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-2O95096 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NKX2-2O95096 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NKX2-2O95096 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-2O95096 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-2O95096 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
NKX2-2O95096 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-2O95096 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NKX2-2O95096 DKKL1P1-201ENST00000400550 698 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 TUBB2BP1-201ENST00000404155 871 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 OR2W2P-201ENST00000406313 909 ntBASIC12.79□□□□□ -0.36
NKX2-2O95096 SLC25A24P2-201ENST00000415059 510 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms