Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBX8Q9HC52 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CBX8Q9HC52 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBX8Q9HC52 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBX8Q9HC52 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBX8Q9HC52 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CBX8Q9HC52 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CBX8Q9HC52 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CBX8Q9HC52 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 HOMER2P2-201ENST00000451621 847 ntBASIC15.56■□□□□ 0.08
CBX8Q9HC52 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 AC008735.3-201ENST00000596646 500 ntBASIC15.56■□□□□ 0.08
CBX8Q9HC52 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 AL162426.1-201ENST00000624141 743 ntBASIC15.56■□□□□ 0.08
CBX8Q9HC52 AL139424.3-202ENST00000641619 917 ntBASIC15.56■□□□□ 0.08
CBX8Q9HC52 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 AC007336.3-201ENST00000623886 2160 ntBASIC15.56■□□□□ 0.08
CBX8Q9HC52 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 LINC02228-202ENST00000641261 2489 ntBASIC15.56■□□□□ 0.08
CBX8Q9HC52 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CBX8Q9HC52 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CBX8Q9HC52 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 AC245140.2-201ENST00000624054 1939 ntBASIC15.55■□□□□ 0.08
CBX8Q9HC52 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CBX8Q9HC52 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 SSR4P1-201ENST00000415143 412 ntBASIC15.55■□□□□ 0.08
CBX8Q9HC52 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.55■□□□□ 0.08
CBX8Q9HC52 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms