Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.58□□□□□ -0.23
PDLIM5Q96HC4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PDLIM5Q96HC4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 AP002761.4-201ENST00000565433 3361 ntBASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 MIR1307-201ENST00000408840 149 ntBASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 AC012618.1-201ENST00000461223 412 ntBASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 BEND3P3-201ENST00000611030 2440 ntBASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDLIM5Q96HC4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 AC125807.2-201ENST00000513358 3514 ntBASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 GGTLC4P-201ENST00000402176 664 ntBASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 MIR3619-201ENST00000579667 83 ntBASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 SIGLEC18P-201ENST00000602271 909 ntBASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 TEKT4P2-202ENST00000559466 1312 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms