Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 INTS4P1-203ENST00000641008 3683 ntBASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 HSD3BP1-201ENST00000286193 1111 ntBASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 NOS2P3-201ENST00000411468 867 ntBASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 NOS2P2-201ENST00000426269 867 ntBASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 AC104115.1-201ENST00000484005 623 ntBASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 RN7SL2-201ENST00000490232 300 ntBASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 RN7SL4P-201ENST00000584058 295 ntBASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO4Q2I0M5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC106872.9-201ENST00000512437 1393 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 FTLP3-201ENST00000427242 528 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC012066.1-201ENST00000439252 694 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC012513.2-201ENST00000441511 1137 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 RN7SL452P-201ENST00000482923 291 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC103724.2-201ENST00000520355 476 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AACSP1-202ENST00000521412 1095 ntBASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO4Q2I0M5 BCAR1P1-201ENST00000553953 636 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms