Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.98□□□□□ -0.49
TMEM235A6NFC5 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 PCDHB17P-202ENST00000623466 3066 ntBASIC11.97□□□□□ -0.49
TMEM235A6NFC5 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AC112492.5-201ENST00000421897 457 ntBASIC11.97□□□□□ -0.49
TMEM235A6NFC5 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AL591471.1-201ENST00000621855 229 ntBASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AC138951.2-201ENST00000623455 1161 ntBASIC11.97□□□□□ -0.49
TMEM235A6NFC5 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AC011481.3-201ENST00000623895 5594 ntBASIC11.97□□□□□ -0.49
TMEM235A6NFC5 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.97□□□□□ -0.49
TMEM235A6NFC5 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 AL355994.2-201ENST00000447882 704 ntBASIC11.96□□□□□ -0.49
TMEM235A6NFC5 TSPY16P-201ENST00000449843 468 ntBASIC11.96□□□□□ -0.49
TMEM235A6NFC5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 AC140658.4-201ENST00000561990 352 ntBASIC11.96□□□□□ -0.49
TMEM235A6NFC5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 PPY2P-201ENST00000582808 702 ntBASIC11.96□□□□□ -0.49
TMEM235A6NFC5 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.96□□□□□ -0.49
TMEM235A6NFC5 AC006453.4-201ENST00000636949 1252 ntBASIC11.96□□□□□ -0.49
TMEM235A6NFC5 Z98885.3-201ENST00000624882 1757 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms