Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HRH3Q9Y5N1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HRH3Q9Y5N1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 SRD5A1P1-201ENST00000442297 786 ntBASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 CLDN5-201ENST00000403084 2357 ntBASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HRH3Q9Y5N1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 AC024257.2-201ENST00000549699 147 ntBASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HRH3Q9Y5N1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HRH3Q9Y5N1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.59■□□□□ 0.89
HRH3Q9Y5N1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HRH3Q9Y5N1 AC142381.2-201ENST00000566120 298 ntBASIC20.59■□□□□ 0.89
HRH3Q9Y5N1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HRH3Q9Y5N1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.59■□□□□ 0.89
HRH3Q9Y5N1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HRH3Q9Y5N1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HRH3Q9Y5N1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 AC135279.3-201ENST00000610945 1311 ntBASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.58■□□□□ 0.89
HRH3Q9Y5N1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 C17orf82-201ENST00000623772 1530 ntBASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HRH3Q9Y5N1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HRH3Q9Y5N1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.55■□□□□ 0.88
HRH3Q9Y5N1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms