Protein–RNA interactions for Protein: Q9UJ94

LINC00527, Putative uncharacterized protein encoded by LINC00527, humanhuman

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00527Q9UJ94 PBX2P1-201ENST00000493219 1291 ntBASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 SYT6-210ENST00000641643 1587 ntBASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LINC00527Q9UJ94 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 AL136162.1-201ENST00000607711 1078 ntBASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LINC00527Q9UJ94 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 AC009086.3-201ENST00000623486 1008 ntBASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00527Q9UJ94 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 AC024257.2-201ENST00000549699 147 ntBASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00527Q9UJ94 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 AC079630.1-202ENST00000618127 1840 ntBASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 SERBP1P1-201ENST00000396021 1160 ntBASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LINC00527Q9UJ94 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 MIR638-201ENST00000385237 100 ntBASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 AC092171.4-201ENST00000609130 632 ntBASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 AC135279.3-201ENST00000610945 1311 ntBASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00527Q9UJ94 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
LINC00527Q9UJ94 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 DUX4L19-201ENST00000557448 1267 ntBASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 AC241377.3-202ENST00000626088 1088 ntBASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 AC241585.3-202ENST00000628937 1088 ntBASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 AC245100.8-202ENST00000629247 1058 ntBASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC00527Q9UJ94 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms