Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GAFA1Q96PS6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.66■□□□□ 0.58
GAFA1Q96PS6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 SRD5A1P1-201ENST00000442297 786 ntBASIC18.66■□□□□ 0.58
GAFA1Q96PS6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 AL353803.4-201ENST00000565882 1934 ntBASIC18.66■□□□□ 0.58
GAFA1Q96PS6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.66■□□□□ 0.58
GAFA1Q96PS6 FP325331.1-202ENST00000623531 1380 ntBASIC18.66■□□□□ 0.58
GAFA1Q96PS6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 DUSP8P3-201ENST00000399571 1760 ntBASIC18.65■□□□□ 0.58
GAFA1Q96PS6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GAFA1Q96PS6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GAFA1Q96PS6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 LINC01529-204ENST00000636474 1715 ntBASIC18.64■□□□□ 0.57
GAFA1Q96PS6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.64■□□□□ 0.57
GAFA1Q96PS6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GAFA1Q96PS6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 AL136116.3-201ENST00000402907 1138 ntBASIC18.63■□□□□ 0.57
GAFA1Q96PS6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.63■□□□□ 0.57
GAFA1Q96PS6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 DUX4L4-201ENST00000566884 1269 ntBASIC18.62■□□□□ 0.57
GAFA1Q96PS6 AC241377.3-202ENST00000626088 1088 ntBASIC18.62■□□□□ 0.57
GAFA1Q96PS6 AC241585.3-202ENST00000628937 1088 ntBASIC18.62■□□□□ 0.57
GAFA1Q96PS6 AC245100.8-202ENST00000629247 1058 ntBASIC18.62■□□□□ 0.57
GAFA1Q96PS6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GAFA1Q96PS6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAFA1Q96PS6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
GAFA1Q96PS6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GAFA1Q96PS6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.61■□□□□ 0.57
GAFA1Q96PS6 AC099791.2-201ENST00000605725 427 ntBASIC18.61■□□□□ 0.57
GAFA1Q96PS6 AC009086.3-201ENST00000623486 1008 ntBASIC18.61■□□□□ 0.57
GAFA1Q96PS6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GAFA1Q96PS6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
GAFA1Q96PS6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 AC008406.3-201ENST00000620001 1374 ntBASIC18.6■□□□□ 0.57
GAFA1Q96PS6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GAFA1Q96PS6 AC006455.2-201ENST00000429931 906 ntBASIC18.6■□□□□ 0.57
GAFA1Q96PS6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms