Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BCAS4Q8TDM0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.53■■□□□ 1.2
BCAS4Q8TDM0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
BCAS4Q8TDM0 AC005229.4-201ENST00000610085 2198 ntBASIC22.53■■□□□ 1.2
BCAS4Q8TDM0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.53■■□□□ 1.2
BCAS4Q8TDM0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BCAS4Q8TDM0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
BCAS4Q8TDM0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
BCAS4Q8TDM0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCAS4Q8TDM0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.52■■□□□ 1.2
BCAS4Q8TDM0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCAS4Q8TDM0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCAS4Q8TDM0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCAS4Q8TDM0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BCAS4Q8TDM0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
BCAS4Q8TDM0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
BCAS4Q8TDM0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
BCAS4Q8TDM0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 AL161729.1-201ENST00000604104 1402 ntBASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.5■■□□□ 1.19
BCAS4Q8TDM0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
BCAS4Q8TDM0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
BCAS4Q8TDM0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
BCAS4Q8TDM0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
BCAS4Q8TDM0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BCAS4Q8TDM0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.49■■□□□ 1.19
BCAS4Q8TDM0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
BCAS4Q8TDM0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 AC079630.1-202ENST00000618127 1840 ntBASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 FAM99A-202ENST00000538190 1989 ntBASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 AC080038.3-201ENST00000623346 1952 ntBASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
BCAS4Q8TDM0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BCAS4Q8TDM0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.46■■□□□ 1.19
BCAS4Q8TDM0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
BCAS4Q8TDM0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
BCAS4Q8TDM0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.46■■□□□ 1.19
BCAS4Q8TDM0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
BCAS4Q8TDM0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
BCAS4Q8TDM0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
BCAS4Q8TDM0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
BCAS4Q8TDM0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
BCAS4Q8TDM0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BCAS4Q8TDM0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BCAS4Q8TDM0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
BCAS4Q8TDM0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
BCAS4Q8TDM0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BCAS4Q8TDM0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
BCAS4Q8TDM0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
BCAS4Q8TDM0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
BCAS4Q8TDM0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
BCAS4Q8TDM0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
BCAS4Q8TDM0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.44■■□□□ 1.18
BCAS4Q8TDM0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
BCAS4Q8TDM0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms