Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC16Q8NEE8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC16Q8NEE8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TTC16Q8NEE8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
TTC16Q8NEE8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.42■■□□□ 1.34
TTC16Q8NEE8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TTC16Q8NEE8 AC027682.1-201ENST00000562846 899 ntBASIC23.42■■□□□ 1.34
TTC16Q8NEE8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.42■■□□□ 1.34
TTC16Q8NEE8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
TTC16Q8NEE8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TTC16Q8NEE8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TTC16Q8NEE8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TTC16Q8NEE8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TTC16Q8NEE8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TTC16Q8NEE8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.41■■□□□ 1.34
TTC16Q8NEE8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 AL138724.1-201ENST00000606771 1088 ntBASIC23.4■■□□□ 1.34
TTC16Q8NEE8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
TTC16Q8NEE8 RASA4CP-201ENST00000424092 1398 ntBASIC23.4■■□□□ 1.34
TTC16Q8NEE8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TTC16Q8NEE8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TTC16Q8NEE8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC16Q8NEE8 LINC01124-201ENST00000409786 2117 ntBASIC23.38■■□□□ 1.33
TTC16Q8NEE8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC16Q8NEE8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC16Q8NEE8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.38■■□□□ 1.33
TTC16Q8NEE8 AC136469.2-201ENST00000623944 1028 ntBASIC23.38■■□□□ 1.33
TTC16Q8NEE8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC16Q8NEE8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TTC16Q8NEE8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TTC16Q8NEE8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
TTC16Q8NEE8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC16Q8NEE8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC16Q8NEE8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC16Q8NEE8 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.37■■□□□ 1.33
TTC16Q8NEE8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.37■■□□□ 1.33
TTC16Q8NEE8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TTC16Q8NEE8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TTC16Q8NEE8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.36■■□□□ 1.33
TTC16Q8NEE8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TTC16Q8NEE8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 AC126544.1-201ENST00000580842 1059 ntBASIC23.34■■□□□ 1.33
TTC16Q8NEE8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TTC16Q8NEE8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms