Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.2■■□□□ 1.14
TRAM1L1Q8N609 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRAM1L1Q8N609 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRAM1L1Q8N609 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.2■■□□□ 1.14
TRAM1L1Q8N609 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 AC096631.2-201ENST00000436136 790 ntBASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAM1L1Q8N609 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 UNC93B3-201ENST00000308076 687 ntBASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
TRAM1L1Q8N609 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 AL138724.1-201ENST00000606771 1088 ntBASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 AL353803.4-201ENST00000565882 1934 ntBASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRAM1L1Q8N609 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 SERBP1P1-201ENST00000396021 1160 ntBASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 pRNA.6-201ENST00000610482 90 ntBASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 pRNA.5-201ENST00000612139 90 ntBASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 pRNA.11-201ENST00000618423 90 ntBASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 pRNA.13-201ENST00000619112 90 ntBASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRAM1L1Q8N609 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRAM1L1Q8N609 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
TRAM1L1Q8N609 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.14■■□□□ 1.14
TRAM1L1Q8N609 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRAM1L1Q8N609 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.14■■□□□ 1.14
TRAM1L1Q8N609 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 MIR3181-201ENST00000578512 73 ntBASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 AL499627.2-201ENST00000606283 725 ntBASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 AC110285.6-201ENST00000617652 491 ntBASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRAM1L1Q8N609 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 AL139246.5-201ENST00000606645 996 ntBASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 AL136162.1-201ENST00000607711 1078 ntBASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
TRAM1L1Q8N609 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms