Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.78■□□□□ 0.76
LINC00346Q8IVM7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 AC233723.2-201ENST00000623798 2106 ntBASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC00346Q8IVM7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LINC00346Q8IVM7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
LINC00346Q8IVM7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.76■□□□□ 0.75
LINC00346Q8IVM7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LINC00346Q8IVM7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.76■□□□□ 0.75
LINC00346Q8IVM7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00346Q8IVM7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00346Q8IVM7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00346Q8IVM7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC00346Q8IVM7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 AL353803.4-201ENST00000565882 1934 ntBASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LINC00346Q8IVM7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC00346Q8IVM7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LINC00346Q8IVM7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00346Q8IVM7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LINC00346Q8IVM7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00346Q8IVM7 KRT125P-201ENST00000546827 989 ntBASIC19.73■□□□□ 0.75
LINC00346Q8IVM7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.73■□□□□ 0.75
LINC00346Q8IVM7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00346Q8IVM7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC00346Q8IVM7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 AC092028.1-203ENST00000608262 953 ntBASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 MIR6722-201ENST00000617286 78 ntBASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC00346Q8IVM7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms