Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CRLF3Q8IUI8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.29■■□□□ 1.16
CRLF3Q8IUI8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 AC103834.1-201ENST00000520383 144 ntBASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CRLF3Q8IUI8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 YBX1P4-201ENST00000392794 808 ntBASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CRLF3Q8IUI8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CRLF3Q8IUI8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CRLF3Q8IUI8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CRLF3Q8IUI8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.26■■□□□ 1.15
CRLF3Q8IUI8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.26■■□□□ 1.15
CRLF3Q8IUI8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.26■■□□□ 1.15
CRLF3Q8IUI8 AL451085.2-201ENST00000605085 799 ntBASIC22.26■■□□□ 1.15
CRLF3Q8IUI8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CRLF3Q8IUI8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 AL022069.1-201ENST00000568025 1636 ntBASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CRLF3Q8IUI8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 MIR4508-201ENST00000584178 70 ntBASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
CRLF3Q8IUI8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 AC242852.2-201ENST00000615738 1807 ntBASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CRLF3Q8IUI8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CRLF3Q8IUI8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CRLF3Q8IUI8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CRLF3Q8IUI8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CRLF3Q8IUI8 ESRRAP2-201ENST00000418437 1549 ntBASIC22.22■■□□□ 1.15
CRLF3Q8IUI8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CRLF3Q8IUI8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.22■■□□□ 1.15
CRLF3Q8IUI8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 AL592295.1-201ENST00000400984 884 ntBASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 LONRF2P2-201ENST00000439212 571 ntBASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 AC019171.1-201ENST00000601251 1056 ntBASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.21■■□□□ 1.15
CRLF3Q8IUI8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms