Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 FOXP1-219ENST00000610810 577 ntTSL 516.79■□□□□ 0.285e-7■■□□□ 13.2
SFPQP23246 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.651e-6■■□□□ 13.2
SFPQP23246 PTTG1IP-206ENST00000480234 398 ntTSL 322.64■■□□□ 1.214e-12■■□□□ 13.2
SFPQP23246 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.26■□□□□ 0.994e-12■■□□□ 13.2
SFPQP23246 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.954e-12■■□□□ 13.2
SFPQP23246 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.82■□□□□ 0.924e-12■■□□□ 13.2
SFPQP23246 ZFPM1-202ENST00000562417 497 ntTSL 319.52■□□□□ 0.722e-6■■□□□ 13.2
SFPQP23246 PTTG1IP-207ENST00000494690 612 ntTSL 513.65□□□□□ -0.225e-12■■□□□ 13.2
SFPQP23246 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.51■□□□□ 0.075e-7■■□□□ 13.2
SFPQP23246 FTX-211ENST00000603672 1077 ntTSL 514.3□□□□□ -0.125e-7■■□□□ 13.2
SFPQP23246 FTX-209ENST00000602812 2356 ntTSL 1 (best)12.13□□□□□ -0.475e-7■■□□□ 13.2
SFPQP23246 FTX-215ENST00000638681 9771 ntTSL 5 BASIC11.46□□□□□ -0.575e-7■■□□□ 13.2
SFPQP23246 FTX-206ENST00000602420 751 ntTSL 36.24□□□□□ -1.415e-7■■□□□ 13.2
SFPQP23246 FTX-218ENST00000641360 3897 nt5.58□□□□□ -1.525e-7■■□□□ 13.2
SFPQP23246 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.56□□□□□ -1.525e-7■■□□□ 13.2
SFPQP23246 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.87■□□□□ 0.299e-12■■□□□ 13.2
SFPQP23246 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.521e-10■■□□□ 13.1
SFPQP23246 ZFAND3-202ENST00000373389 531 ntTSL 512.36□□□□□ -0.436e-7■■□□□ 13.1
SFPQP23246 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC12.16□□□□□ -0.464e-6■■□□□ 13.1
SFPQP23246 NEDD9-204ENST00000448183 4934 ntTSL 1 (best)9.15□□□□□ -0.944e-6■■□□□ 13.1
SFPQP23246 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.984e-6■■□□□ 13.1
SFPQP23246 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.08□□□□□ -1.124e-6■■□□□ 13.1
SFPQP23246 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.254e-6■■□□□ 13.1
SFPQP23246 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.09■□□□□ 0.016e-7■■□□□ 13.1
SFPQP23246 ARID3A-205ENST00000587532 1016 ntTSL 520.63■□□□□ 0.898e-7■■□□□ 13.1
SFPQP23246 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.888e-7■■□□□ 13.1
SFPQP23246 ARID3A-202ENST00000457152 549 ntTSL 514.76□□□□□ -0.058e-7■■□□□ 13.1
SFPQP23246 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.22e-6■■□□□ 13.1
SFPQP23246 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.132e-6■■□□□ 13.1
SFPQP23246 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.12e-6■■□□□ 13.1
SFPQP23246 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.112e-6■■□□□ 13.1
SFPQP23246 TGFBR3-210ENST00000533089 6455 ntTSL 1 (best)8□□□□□ -1.132e-6■■□□□ 13.1
SFPQP23246 TGFBR3-209ENST00000532540 3913 ntTSL 1 (best)7.88□□□□□ -1.152e-6■■□□□ 13.1
SFPQP23246 NAP1L1-222ENST00000551992 1074 ntTSL 526.97■■□□□ 1.912e-9■■□□□ 13.1
SFPQP23246 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.282e-9■■□□□ 13.1
SFPQP23246 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.082e-9■■□□□ 13.1
SFPQP23246 NAP1L1-214ENST00000548273 818 ntTSL 314.49□□□□□ -0.092e-9■■□□□ 13.1
SFPQP23246 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC13.8□□□□□ -0.22e-9■■□□□ 13.1
SFPQP23246 NAP1L1-217ENST00000549988 544 ntTSL 313.55□□□□□ -0.242e-9■■□□□ 13.1
SFPQP23246 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC13.52□□□□□ -0.252e-9■■□□□ 13.1
SFPQP23246 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC12.55□□□□□ -0.42e-9■■□□□ 13.1
SFPQP23246 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC12.29□□□□□ -0.442e-9■■□□□ 13.1
SFPQP23246 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC12.14□□□□□ -0.472e-9■■□□□ 13.1
SFPQP23246 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC12.02□□□□□ -0.492e-9■■□□□ 13.1
SFPQP23246 NAP1L1-215ENST00000549479 573 ntTSL 211.94□□□□□ -0.52e-9■■□□□ 13.1
SFPQP23246 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC11.32□□□□□ -0.62e-9■■□□□ 13.1
SFPQP23246 NAP1L1-221ENST00000551600 786 ntTSL 511.1□□□□□ -0.632e-9■■□□□ 13.1
SFPQP23246 NAP1L1-209ENST00000547704 760 ntTSL 511.1□□□□□ -0.632e-9■■□□□ 13.1
SFPQP23246 NAP1L1-207ENST00000547479 623 ntTSL 510.8□□□□□ -0.682e-9■■□□□ 13.1
SFPQP23246 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.222e-9■■□□□ 13.1
SFPQP23246 NAP1L1-219ENST00000551500 552 ntTSL 1 (best)6.03□□□□□ -1.442e-9■■□□□ 13.1
SFPQP23246 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.67□□□□□ -1.52e-9■■□□□ 13.1
SFPQP23246 NAP1L1-218ENST00000550934 851 ntTSL 54.98□□□□□ -1.612e-9■■□□□ 13.1
SFPQP23246 IGF2BP3-206ENST00000468005 2948 ntTSL 516.38■□□□□ 0.215e-8■■□□□ 13
SFPQP23246 RREB1-208ENST00000483150 2833 ntTSL 1 (best)14.6□□□□□ -0.072e-6■■□□□ 13
SFPQP23246 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.076e-7■■□□□ 13
SFPQP23246 RBM14-RBM4-202ENST00000421355 2034 ntTSL 221.59■■□□□ 1.056e-7■■□□□ 13
SFPQP23246 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.89■□□□□ 0.776e-7■■□□□ 13
SFPQP23246 RBM14-RBM4-204ENST00000511114 523 ntTSL 413.67□□□□□ -0.226e-7■■□□□ 13
SFPQP23246 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28■■■□□ 2.073e-6■■□□□ 13
SFPQP23246 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.78■■□□□ 1.883e-6■■□□□ 13
SFPQP23246 EDEM1-206ENST00000465369 1956 ntTSL 526.64■■□□□ 1.863e-6■■□□□ 13
SFPQP23246 ZC3H13-203ENST00000428921 695 ntAPPRIS ALT2 TSL 324.2■■□□□ 1.463e-6■■□□□ 13
SFPQP23246 EDEM1-205ENST00000465187 585 ntTSL 424.19■■□□□ 1.463e-6■■□□□ 13
SFPQP23246 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.68■■□□□ 1.383e-6■■□□□ 13
SFPQP23246 PTPRF-207ENST00000436724 2168 ntTSL 1 (best)23.44■■□□□ 1.343e-6■■□□□ 13
SFPQP23246 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.273e-6■■□□□ 13
SFPQP23246 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.033e-6■■□□□ 13
SFPQP23246 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.943e-6■■□□□ 13
SFPQP23246 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.82■□□□□ 0.923e-6■■□□□ 13
SFPQP23246 IGDCC3-202ENST00000558354 1783 ntAPPRIS ALT2 TSL 520.57■□□□□ 0.883e-6■■□□□ 13
SFPQP23246 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.863e-6■■□□□ 13
SFPQP23246 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.793e-6■■□□□ 13
SFPQP23246 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.793e-6■■□□□ 13
SFPQP23246 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.713e-6■■□□□ 13
SFPQP23246 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.633e-6■■□□□ 13
SFPQP23246 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.93■□□□□ 0.463e-6■■□□□ 13
SFPQP23246 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.69■□□□□ 0.423e-6■■□□□ 13
SFPQP23246 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.373e-6■■□□□ 13
SFPQP23246 PTPRF-202ENST00000372405 1962 ntTSL 1 (best)15.28■□□□□ 0.043e-6■■□□□ 13
SFPQP23246 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.013e-6■■□□□ 13
SFPQP23246 EDEM1-202ENST00000434243 978 ntTSL 214.92□□□□□ -0.023e-6■■□□□ 13
SFPQP23246 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC14.37□□□□□ -0.116e-9■■□□□ 13
SFPQP23246 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.243e-6■■□□□ 13
SFPQP23246 PTPRF-208ENST00000437607 788 ntTSL 1 (best)13.36□□□□□ -0.273e-6■■□□□ 13
SFPQP23246 SLC44A1-205ENST00000470972 10433 ntTSL 1 (best)13.31□□□□□ -0.283e-6■■□□□ 13
SFPQP23246 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.296e-9■■□□□ 13
SFPQP23246 NHSL1-201ENST00000342260 736 ntAPPRIS ALT2 TSL 512.76□□□□□ -0.373e-6■■□□□ 13
SFPQP23246 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.383e-6■■□□□ 13
SFPQP23246 AC008014.1-203ENST00000611243 1569 ntTSL 1 (best) BASIC10.56□□□□□ -0.723e-6■■□□□ 13
SFPQP23246 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC9.39□□□□□ -0.913e-6■■□□□ 13
SFPQP23246 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.073e-6■■□□□ 13
SFPQP23246 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.66□□□□□ -1.186e-9■■□□□ 13
SFPQP23246 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.266e-9■■□□□ 13
SFPQP23246 PUM2-209ENST00000440577 4352 ntTSL 1 (best)6.83□□□□□ -1.326e-9■■□□□ 13
SFPQP23246 OLA1-207ENST00000429575 485 ntTSL 36.8□□□□□ -1.323e-6■■□□□ 13
SFPQP23246 MREG-204ENST00000439791 576 ntTSL 46.3□□□□□ -1.43e-6■■□□□ 13
SFPQP23246 MREG-202ENST00000420348 584 ntTSL 45.37□□□□□ -1.553e-6■■□□□ 13
SFPQP23246 MREG-203ENST00000424992 560 ntTSL 55.29□□□□□ -1.563e-6■■□□□ 13
SFPQP23246 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.623e-6■■□□□ 13
Retrieved 100 of 4,991 protein–RNA pairs in 78.5 ms