RNA–Protein interactions for RNA: ENST00000428921.1

ZC3H13-203, Transcript of zinc finger CCCH-type containing 13, humanhuman

APPRIS ALT2 TSL 3

Gene ZC3H13, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H13-203ENST00000428921 NISCHQ9Y2I1 1504 aa52.35■■■■■ 5.97
ZC3H13-203ENST00000428921 CCDC180Q9P1Z9 1646 aa46.32■■■■■ 5
ZC3H13-203ENST00000428921 ABCC9O60706 1549 aa44.66■■■■■ 4.74
ZC3H13-203ENST00000428921 ZCCHC6Q5VYS8 1495 aaKnown RBP43.77■■■■■ 4.6
ZC3H13-203ENST00000428921 DCAF1Q9Y4B6 1507 aa43.4■■■■■ 4.54
ZC3H13-203ENST00000428921 NACADO15069 1562 aa43.39■■■■■ 4.54
ZC3H13-203ENST00000428921 MYO15BQ96JP2 1530 aa43.38■■■■■ 4.53
ZC3H13-203ENST00000428921 DCAF8L2P0C7V8 631 aa43.33■■■■■ 4.53
ZC3H13-203ENST00000428921 RB1CC1Q8TDY2 1594 aa43.28■■■■■ 4.52
ZC3H13-203ENST00000428921 UNC13AQ9UPW8 1703 aa42.27■■■■■ 4.36
ZC3H13-203ENST00000428921 SCRIBQ14160 1630 aa42.27■■■■■ 4.36
ZC3H13-203ENST00000428921 BICRAQ9NZM4 1560 aa41.94■■■■■ 4.3
ZC3H13-203ENST00000428921 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
ZC3H13-203ENST00000428921 PABPN1Q86U42 306 aaKnown RBP eCLIP41.79■■■■■ 4.28
ZC3H13-203ENST00000428921 SHROOM4Q9ULL8 1493 aa41.65■■■■■ 4.26
ZC3H13-203ENST00000428921 EIF4G1Q04637 1599 aaKnown RBP40.79■■■■■ 4.12
ZC3H13-203ENST00000428921 CECR2Q9BXF3 1484 aa40.69■■■■■ 4.1
ZC3H13-203ENST00000428921 BAZ1AQ9NRL2 1556 aaPredicted RBP40.56■■■■■ 4.08
ZC3H13-203ENST00000428921 SMARCA4P51532 1647 aa40.5■■■■■ 4.07
ZC3H13-203ENST00000428921 CC2D2AQ9P2K1 1620 aa40.45■■■■■ 4.07
ZC3H13-203ENST00000428921 MROH2BQ7Z745 1585 aa40.35■■■■■ 4.05
ZC3H13-203ENST00000428921 PEG3Q9GZU2 1588 aa40.14■■■■■ 4.02
ZC3H13-203ENST00000428921 SMARCA2P51531 1590 aa40.13■■■■■ 4.01
ZC3H13-203ENST00000428921 ATAD2BQ9ULI0 1458 aa40.13■■■■■ 4.01
ZC3H13-203ENST00000428921 RSF1Q96T23 1441 aaPredicted RBP40.1■■■■■ 4.01
ZC3H13-203ENST00000428921 NCAPD3P42695 1498 aa40.01■■■■■ 4
ZC3H13-203ENST00000428921 WIZO95785 1651 aa39.92■■■■□ 3.98
ZC3H13-203ENST00000428921 HMGXB3Q12766 1538 aa39.91■■■■□ 3.98
ZC3H13-203ENST00000428921 BAZ1BQ9UIG0 1483 aaKnown RBP39.83■■■■□ 3.97
ZC3H13-203ENST00000428921 TOP2AP11388 1531 aaKnown RBP39.59■■■■□ 3.93
ZC3H13-203ENST00000428921 SUPT5HO00267 1087 aaKnown RBP39.43■■■■□ 3.9
ZC3H13-203ENST00000428921 CCDC88BA6NC98 1476 aa39.07■■■■□ 3.85
ZC3H13-203ENST00000428921 LAMC3Q9Y6N6 1575 aa38.87■■■■□ 3.81
ZC3H13-203ENST00000428921 CADPSQ9ULU8 1353 aa38.87■■■■□ 3.81
ZC3H13-203ENST00000428921 NESP48681 1621 aa38.83■■■■□ 3.81
ZC3H13-203ENST00000428921 CFTRP13569 1480 aa38.79■■■■□ 3.8
ZC3H13-203ENST00000428921 DNAJC5Q9H3Z4 198 aa38.7■■■■□ 3.79
ZC3H13-203ENST00000428921 PDS5BQ9NTI5 1447 aa38.57■■■■□ 3.77
ZC3H13-203ENST00000428921 PRDM2Q13029 1718 aa38.54■■■■□ 3.76
ZC3H13-203ENST00000428921 ERCC6Q03468 1493 aa38.47■■■■□ 3.75
ZC3H13-203ENST00000428921 FANCD2Q9BXW9 1451 aa38.43■■■■□ 3.74
ZC3H13-203ENST00000428921 KIF21AQ7Z4S6 1674 aa38.39■■■■□ 3.74
ZC3H13-203ENST00000428921 CEP164Q9UPV0 1460 aa38.34■■■■□ 3.73
ZC3H13-203ENST00000428921 CUX2O14529 1486 aa38.2■■■■□ 3.71
ZC3H13-203ENST00000428921 THOC2Q8NI27 1593 aaKnown RBP38.17■■■■□ 3.7
ZC3H13-203ENST00000428921 MRC2Q9UBG0 1479 aa38.16■■■■□ 3.7
ZC3H13-203ENST00000428921 WDR62O43379 1518 aa38.03■■■■□ 3.68
ZC3H13-203ENST00000428921 URB2Q14146 1524 aaKnown RBP38.01■■■■□ 3.67
ZC3H13-203ENST00000428921 ABCC8Q09428 1581 aa37.93■■■■□ 3.66
ZC3H13-203ENST00000428921 DNMBPQ6XZF7 1577 aa37.91■■■■□ 3.66
ZC3H13-203ENST00000428921 TOPBP1Q92547 1522 aa37.89■■■■□ 3.66
ZC3H13-203ENST00000428921 CUX1P39880 1505 aa37.82■■■■□ 3.65
ZC3H13-203ENST00000428921 WRNQ14191 1432 aaPredicted RBP eCLIP37.8■■■■□ 3.64
ZC3H13-203ENST00000428921 SYNJ1O43426 1573 aa37.68■■■■□ 3.62
ZC3H13-203ENST00000428921 TOP2BQ02880 1626 aa37.67■■■■□ 3.62
ZC3H13-203ENST00000428921 BIVM-ERCC5R4GMW8 1640 aa37.66■■■■□ 3.62
ZC3H13-203ENST00000428921 POLA1P09884 1462 aaPredicted RBP37.61■■■■□ 3.61
ZC3H13-203ENST00000428921 FGD5Q6ZNL6 1462 aa37.6■■■■□ 3.61
ZC3H13-203ENST00000428921 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
ZC3H13-203ENST00000428921 SOGA1O94964 1423 aa37.43■■■■□ 3.58
ZC3H13-203ENST00000428921 TARBP1Q13395 1621 aaKnown RBP37.43■■■■□ 3.58
ZC3H13-203ENST00000428921 RAD54L2Q9Y4B4 1467 aa37.4■■■■□ 3.58
ZC3H13-203ENST00000428921 ABCA10Q8WWZ4 1543 aa37.29■■■■□ 3.56
ZC3H13-203ENST00000428921 WDR97A6NE52 1622 aa37.28■■■■□ 3.56
ZC3H13-203ENST00000428921 ZNF608Q9ULD9 1512 aaPredicted RBP37.26■■■■□ 3.55
ZC3H13-203ENST00000428921 TRIM41Q8WV44 630 aa37.24■■■■□ 3.55
ZC3H13-203ENST00000428921 CHIC1Q5VXU3 224 aa37.19■■■■□ 3.54
ZC3H13-203ENST00000428921 EIF4G3O43432 1585 aaKnown RBP37.17■■■■□ 3.54
ZC3H13-203ENST00000428921 TDRD9Q8NDG6 1382 aaKnown RBP37.13■■■■□ 3.53
ZC3H13-203ENST00000428921 AQRO60306 1485 aaKnown RBP eCLIP37.1■■■■□ 3.53
ZC3H13-203ENST00000428921 ABCA5Q8WWZ7 1642 aa37.1■■■■□ 3.53
ZC3H13-203ENST00000428921 GAPVD1Q14C86 1478 aa37.03■■■■□ 3.52
ZC3H13-203ENST00000428921 KIF27Q86VH2 1401 aa36.97■■■■□ 3.51
ZC3H13-203ENST00000428921 GRIN2BQ13224 1484 aa36.96■■■■□ 3.51
ZC3H13-203ENST00000428921 PBRM1Q86U86 1689 aa36.92■■■■□ 3.5
ZC3H13-203ENST00000428921 ERICH3Q5RHP9 1530 aa36.85■■■■□ 3.49
ZC3H13-203ENST00000428921 SNAPC4Q5SXM2 1469 aa36.82■■■■□ 3.49
ZC3H13-203ENST00000428921 MAGI1Q96QZ7 1491 aaPredicted RBP36.82■■■■□ 3.48
ZC3H13-203ENST00000428921 RUSC2Q8N2Y8 1516 aa36.76■■■■□ 3.48
ZC3H13-203ENST00000428921 ADAMTS12P58397 1594 aa36.71■■■■□ 3.47
ZC3H13-203ENST00000428921 IGF1RP08069 1367 aa36.71■■■■□ 3.47
ZC3H13-203ENST00000428921 EEA1Q15075 1411 aa36.69■■■■□ 3.46
ZC3H13-203ENST00000428921 SYNJ2O15056 1496 aa36.65■■■■□ 3.46
ZC3H13-203ENST00000428921 FHAD1B1AJZ9 1412 aa36.64■■■■□ 3.46
ZC3H13-203ENST00000428921 CUL7Q14999 1698 aa36.64■■■■□ 3.46
ZC3H13-203ENST00000428921 CHD1O14646 1710 aa36.56■■■■□ 3.44
ZC3H13-203ENST00000428921 CARMIL1Q5VZK9 1371 aa36.52■■■■□ 3.44
ZC3H13-203ENST00000428921 CHMP7Q8WUX9 453 aaPredicted RBP36.51■■■■□ 3.44
ZC3H13-203ENST00000428921 GRIN2AQ12879 1464 aa36.49■■■■□ 3.43
ZC3H13-203ENST00000428921 FBLN2P98095 1184 aa36.48■■■■□ 3.43
ZC3H13-203ENST00000428921 CSRNP3Q8WYN3 585 aa36.46■■■■□ 3.43
ZC3H13-203ENST00000428921 OSCARQ8IYS5 282 aa36.43■■■■□ 3.42
ZC3H13-203ENST00000428921 PRXQ9BXM0 1461 aa36.43■■■■□ 3.42
ZC3H13-203ENST00000428921 FAM9AQ8IZU1 332 aaPredicted RBP36.41■■■■□ 3.42
ZC3H13-203ENST00000428921 RAPGEF2Q9Y4G8 1499 aa36.38■■■■□ 3.41
ZC3H13-203ENST00000428921 NUP160Q12769 1436 aa36.32■■■■□ 3.4
ZC3H13-203ENST00000428921 CEP170Q5SW79 1584 aa36.27■■■■□ 3.4
ZC3H13-203ENST00000428921 KIF21BO75037 1637 aa36.26■■■■□ 3.4
ZC3H13-203ENST00000428921 CLASP1Q7Z460 1538 aa36.23■■■■□ 3.39
ZC3H13-203ENST00000428921 KIAA0586Q9BVV6 1533 aa36.09■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 266.3 ms