RNA–Protein interactions for RNA: ENST00000282007.7

ZC3H13-202, Transcript of zinc finger CCCH-type containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZC3H13, Length 6,412 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H13-202ENST00000282007 PELP1Q8IZL8 1130 aaKnown RBP18.19■□□□□ 0.5
ZC3H13-202ENST00000282007 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
ZC3H13-202ENST00000282007 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
ZC3H13-202ENST00000282007 MYT1Q01538 1121 aa17.3■□□□□ 0.36
ZC3H13-202ENST00000282007 ERICH6Q7L0X2 663 aa17.28■□□□□ 0.36
ZC3H13-202ENST00000282007 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
ZC3H13-202ENST00000282007 APLP2Q06481 763 aa16.8■□□□□ 0.28
ZC3H13-202ENST00000282007 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
ZC3H13-202ENST00000282007 FAM9AQ8IZU1 332 aaPredicted RBP16.67■□□□□ 0.26
ZC3H13-202ENST00000282007 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
ZC3H13-202ENST00000282007 NEFLP07196 543 aa16.59■□□□□ 0.25
ZC3H13-202ENST00000282007 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
ZC3H13-202ENST00000282007 DAXXQ9UER7 740 aaPredicted RBP16.39■□□□□ 0.21
ZC3H13-202ENST00000282007 TTBK1Q5TCY1 1321 aaPredicted RBP16.3■□□□□ 0.2
ZC3H13-202ENST00000282007 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
ZC3H13-202ENST00000282007 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
ZC3H13-202ENST00000282007 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
ZC3H13-202ENST00000282007 ZNF316A6NFI3 1004 aaPredicted RBP15.88■□□□□ 0.13
ZC3H13-202ENST00000282007 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
ZC3H13-202ENST00000282007 ATP1B4Q9UN42 357 aaPredicted RBP15.71■□□□□ 0.11
ZC3H13-202ENST00000282007 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
ZC3H13-202ENST00000282007 RANGAP1P46060 587 aaPredicted RBP15.55■□□□□ 0.08
ZC3H13-202ENST00000282007 GLIPR1L2Q4G1C9 344 aa15.52■□□□□ 0.08
ZC3H13-202ENST00000282007 UBTFP17480 764 aaKnown RBP15.51■□□□□ 0.07
ZC3H13-202ENST00000282007 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
ZC3H13-202ENST00000282007 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.06
ZC3H13-202ENST00000282007 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
ZC3H13-202ENST00000282007 ANP32BQ92688 251 aaKnown RBP15.33■□□□□ 0.04
ZC3H13-202ENST00000282007 HRCP23327 699 aa15.33■□□□□ 0.04
ZC3H13-202ENST00000282007 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
ZC3H13-202ENST00000282007 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
ZC3H13-202ENST00000282007 CDK11AQ9UQ88 783 aaPredicted RBP15.29■□□□□ 0.04
ZC3H13-202ENST00000282007 SLC4A1APQ9BWU0 796 aaKnown RBP15.25■□□□□ 0.03
ZC3H13-202ENST00000282007 EIF5BO60841 1220 aaKnown RBP15.24■□□□□ 0.03
ZC3H13-202ENST00000282007 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
ZC3H13-202ENST00000282007 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
ZC3H13-202ENST00000282007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.1■□□□□ 0.01
ZC3H13-202ENST00000282007 HNRNPUL2Q1KMD3 747 aaKnown RBP15.1■□□□□ 0.01
ZC3H13-202ENST00000282007 NEFMP07197 916 aa15.09■□□□□ 0.01
ZC3H13-202ENST00000282007 ITGAEP38570 1179 aa15.07■□□□□ 0
ZC3H13-202ENST00000282007 DIEXFQ68CQ4 756 aaKnown RBP15.06■□□□□ 0
ZC3H13-202ENST00000282007 CANXP27824 592 aaKnown RBP15.04■□□□□ -0
ZC3H13-202ENST00000282007 CDK11BP21127 795 aaKnown RBP14.97□□□□□ -0.01
ZC3H13-202ENST00000282007 ANP32CO43423 234 aa14.96□□□□□ -0.01
ZC3H13-202ENST00000282007 HSP90AA1P07900 732 aaKnown RBP14.96□□□□□ -0.01
ZC3H13-202ENST00000282007 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
ZC3H13-202ENST00000282007 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
ZC3H13-202ENST00000282007 BCANQ96GW7 911 aa14.93□□□□□ -0.02
ZC3H13-202ENST00000282007 PPARGC1BQ86YN6 1023 aaKnown RBP14.92□□□□□ -0.02
ZC3H13-202ENST00000282007 GTF3C3Q9Y5Q9 886 aa14.89□□□□□ -0.03
ZC3H13-202ENST00000282007 CHIC1Q5VXU3 224 aa14.86□□□□□ -0.03
ZC3H13-202ENST00000282007 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
ZC3H13-202ENST00000282007 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
ZC3H13-202ENST00000282007 NPM2Q86SE8 214 aaKnown RBP14.78□□□□□ -0.04
ZC3H13-202ENST00000282007 BCL11AQ9H165 835 aa14.77□□□□□ -0.04
ZC3H13-202ENST00000282007 ANP32EQ9BTT0 268 aa14.76□□□□□ -0.05
ZC3H13-202ENST00000282007 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
ZC3H13-202ENST00000282007 TRIM44Q96DX7 344 aaPredicted RBP14.74□□□□□ -0.05
ZC3H13-202ENST00000282007 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
ZC3H13-202ENST00000282007 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.63□□□□□ -0.07
ZC3H13-202ENST00000282007 NCLP19338 710 aaKnown RBP14.62□□□□□ -0.07
ZC3H13-202ENST00000282007 NEUROD1Q13562 356 aa14.61□□□□□ -0.07
ZC3H13-202ENST00000282007 ZNF326Q5BKZ1 582 aaKnown RBP14.6□□□□□ -0.07
ZC3H13-202ENST00000282007 ACIN1Q9UKV3 1341 aaKnown RBP14.6□□□□□ -0.07
ZC3H13-202ENST00000282007 GOLGA6L22H0YM25 854 aa14.57□□□□□ -0.08
ZC3H13-202ENST00000282007 ERICH6BQ5W0A0 696 aa14.56□□□□□ -0.08
ZC3H13-202ENST00000282007 ZRSR1Q15695 479 aaKnown RBP14.52□□□□□ -0.09
ZC3H13-202ENST00000282007 BECN1Q14457 450 aa14.51□□□□□ -0.09
ZC3H13-202ENST00000282007 DDRGK1Q96HY6 314 aa14.5□□□□□ -0.09
ZC3H13-202ENST00000282007 NBR1Q14596 966 aa14.48□□□□□ -0.09
ZC3H13-202ENST00000282007 PTMAP06454 111 aaKnown RBP14.48□□□□□ -0.09
ZC3H13-202ENST00000282007 ARXQ96QS3 562 aa14.47□□□□□ -0.09
ZC3H13-202ENST00000282007 FKBP8Q14318 412 aa14.46□□□□□ -0.09
ZC3H13-202ENST00000282007 CCDC136Q96JN2 1154 aa14.46□□□□□ -0.09
ZC3H13-202ENST00000282007 MYH16Q9H6N6 1097 aa14.45□□□□□ -0.1
ZC3H13-202ENST00000282007 DNTTIP2Q5QJE6 756 aaKnown RBP14.45□□□□□ -0.1
ZC3H13-202ENST00000282007 NRDCO43847 1150 aa14.44□□□□□ -0.1
ZC3H13-202ENST00000282007 GOLGA6L6A8MZA4 724 aa14.41□□□□□ -0.1
ZC3H13-202ENST00000282007 L1TD1Q5T7N2 865 aaKnown RBP14.38□□□□□ -0.11
ZC3H13-202ENST00000282007 LOC105371045A0A1W2PR82 267 aa14.36□□□□□ -0.11
ZC3H13-202ENST00000282007 PPM1GO15355 546 aaPredicted RBP14.35□□□□□ -0.11
ZC3H13-202ENST00000282007 NAP1L5Q96NT1 182 aaPredicted RBP14.35□□□□□ -0.11
ZC3H13-202ENST00000282007 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
ZC3H13-202ENST00000282007 CHAF1AQ13111 956 aaPredicted RBP14.31□□□□□ -0.12
ZC3H13-202ENST00000282007 ESF1Q9H501 851 aaKnown RBP14.27□□□□□ -0.12
ZC3H13-202ENST00000282007 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
ZC3H13-202ENST00000282007 CASC1Q6TDU7 716 aa14.26□□□□□ -0.13
ZC3H13-202ENST00000282007 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
ZC3H13-202ENST00000282007 FAM9BQ8IZU0 186 aa14.21□□□□□ -0.14
ZC3H13-202ENST00000282007 TONSLQ96HA7 1378 aa14.2□□□□□ -0.14
ZC3H13-202ENST00000282007 TNNT3P45378 269 aaPredicted RBP14.19□□□□□ -0.14
ZC3H13-202ENST00000282007 STAG3Q9UJ98 1225 aa14.18□□□□□ -0.14
ZC3H13-202ENST00000282007 USP35Q9P2H5 1018 aa14.14□□□□□ -0.15
ZC3H13-202ENST00000282007 PNNQ9H307 717 aaKnown RBP14.13□□□□□ -0.15
ZC3H13-202ENST00000282007 MSNP26038 577 aaKnown RBP14.13□□□□□ -0.15
ZC3H13-202ENST00000282007 CALRP27797 417 aaKnown RBP14.12□□□□□ -0.15
ZC3H13-202ENST00000282007 PLCB2Q00722 1185 aa14.12□□□□□ -0.15
ZC3H13-202ENST00000282007 CHMP4BQ9H444 224 aaKnown RBP14.1□□□□□ -0.15
ZC3H13-202ENST00000282007 MRS2Q9HD23 443 aa14.09□□□□□ -0.15
ZC3H13-202ENST00000282007 SALL2Q9Y467 1007 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms