Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26■■□□□ 1.75
ALDH1A1P00352 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
ALDH1A1P00352 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26■■□□□ 1.75
ALDH1A1P00352 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
ALDH1A1P00352 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ALDH1A1P00352 CROCCP5-201ENST00000436658 830 ntBASIC25.99■■□□□ 1.75
ALDH1A1P00352 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.99■■□□□ 1.75
ALDH1A1P00352 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
ALDH1A1P00352 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.99■■□□□ 1.75
ALDH1A1P00352 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.99■■□□□ 1.75
ALDH1A1P00352 AC066615.1-201ENST00000640911 628 ntBASIC25.99■■□□□ 1.75
ALDH1A1P00352 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.99■■□□□ 1.75
ALDH1A1P00352 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.99■■□□□ 1.75
ALDH1A1P00352 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ALDH1A1P00352 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
ALDH1A1P00352 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
ALDH1A1P00352 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ALDH1A1P00352 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ALDH1A1P00352 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.98■■□□□ 1.75
ALDH1A1P00352 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.98■■□□□ 1.75
ALDH1A1P00352 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.98■■□□□ 1.75
ALDH1A1P00352 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ALDH1A1P00352 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ALDH1A1P00352 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
ALDH1A1P00352 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ALDH1A1P00352 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.98■■□□□ 1.75
ALDH1A1P00352 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ALDH1A1P00352 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
ALDH1A1P00352 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ALDH1A1P00352 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.97■■□□□ 1.75
ALDH1A1P00352 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ALDH1A1P00352 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ALDH1A1P00352 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
ALDH1A1P00352 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ALDH1A1P00352 CD99P1-205ENST00000527459 561 ntBASIC25.97■■□□□ 1.75
ALDH1A1P00352 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.97■■□□□ 1.75
ALDH1A1P00352 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.97■■□□□ 1.75
ALDH1A1P00352 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.97■■□□□ 1.75
ALDH1A1P00352 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ALDH1A1P00352 SLC6A10P-202ENST00000431994 2058 ntBASIC25.97■■□□□ 1.75
ALDH1A1P00352 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ALDH1A1P00352 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ALDH1A1P00352 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.96■■□□□ 1.75
ALDH1A1P00352 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.96■■□□□ 1.75
ALDH1A1P00352 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ALDH1A1P00352 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.96■■□□□ 1.75
ALDH1A1P00352 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.95■■□□□ 1.74
ALDH1A1P00352 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
ALDH1A1P00352 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.95■■□□□ 1.74
ALDH1A1P00352 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.95■■□□□ 1.74
ALDH1A1P00352 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.95■■□□□ 1.74
ALDH1A1P00352 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
ALDH1A1P00352 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ALDH1A1P00352 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ALDH1A1P00352 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.94■■□□□ 1.74
ALDH1A1P00352 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ALDH1A1P00352 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
ALDH1A1P00352 AP004607.4-201ENST00000530158 1459 ntBASIC25.93■■□□□ 1.74
ALDH1A1P00352 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.93■■□□□ 1.74
ALDH1A1P00352 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ALDH1A1P00352 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
ALDH1A1P00352 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
ALDH1A1P00352 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ALDH1A1P00352 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
ALDH1A1P00352 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.93■■□□□ 1.74
ALDH1A1P00352 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ALDH1A1P00352 ALDH1A3-203ENST00000557963 1670 ntBASIC25.93■■□□□ 1.74
ALDH1A1P00352 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
ALDH1A1P00352 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.93■■□□□ 1.74
ALDH1A1P00352 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
ALDH1A1P00352 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ALDH1A1P00352 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.92■■□□□ 1.74
ALDH1A1P00352 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.92■■□□□ 1.74
ALDH1A1P00352 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ALDH1A1P00352 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
ALDH1A1P00352 GPX1P1-201ENST00000388829 606 ntBASIC25.92■■□□□ 1.74
ALDH1A1P00352 KRT19P1-201ENST00000405746 1186 ntBASIC25.92■■□□□ 1.74
ALDH1A1P00352 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
ALDH1A1P00352 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ALDH1A1P00352 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.92■■□□□ 1.74
ALDH1A1P00352 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ALDH1A1P00352 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ALDH1A1P00352 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ALDH1A1P00352 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.91■■□□□ 1.74
ALDH1A1P00352 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ALDH1A1P00352 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ALDH1A1P00352 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
ALDH1A1P00352 KRT18P11-201ENST00000435214 1283 ntBASIC25.91■■□□□ 1.74
ALDH1A1P00352 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ALDH1A1P00352 DUX4L4-201ENST00000566884 1269 ntBASIC25.91■■□□□ 1.74
ALDH1A1P00352 TPRG1LP1-201ENST00000598702 760 ntBASIC25.91■■□□□ 1.74
ALDH1A1P00352 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25.91■■□□□ 1.74
ALDH1A1P00352 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ALDH1A1P00352 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.91■■□□□ 1.74
ALDH1A1P00352 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.91■■□□□ 1.74
ALDH1A1P00352 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ALDH1A1P00352 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.9■■□□□ 1.74
ALDH1A1P00352 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
ALDH1A1P00352 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ALDH1A1P00352 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms