Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRICKLE3O43900 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.57■■□□□ 1.04
PRICKLE3O43900 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRICKLE3O43900 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.57■■□□□ 1.04
PRICKLE3O43900 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.57■■□□□ 1.04
PRICKLE3O43900 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.57■■□□□ 1.04
PRICKLE3O43900 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.57■■□□□ 1.04
PRICKLE3O43900 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PRICKLE3O43900 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.57■■□□□ 1.04
PRICKLE3O43900 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRICKLE3O43900 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 LINC01529-204ENST00000636474 1715 ntBASIC21.56■■□□□ 1.04
PRICKLE3O43900 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRICKLE3O43900 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PRICKLE3O43900 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 AC092171.4-201ENST00000609130 632 ntBASIC21.56■■□□□ 1.04
PRICKLE3O43900 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PRICKLE3O43900 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 DUX4L19-201ENST00000557448 1267 ntBASIC21.55■■□□□ 1.04
PRICKLE3O43900 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 AC009086.3-201ENST00000623486 1008 ntBASIC21.55■■□□□ 1.04
PRICKLE3O43900 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PRICKLE3O43900 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRICKLE3O43900 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
PRICKLE3O43900 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.54■■□□□ 1.04
PRICKLE3O43900 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PRICKLE3O43900 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRICKLE3O43900 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.54■■□□□ 1.04
PRICKLE3O43900 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRICKLE3O43900 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
PRICKLE3O43900 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRICKLE3O43900 UNC93B3-201ENST00000308076 687 ntBASIC21.53■■□□□ 1.04
PRICKLE3O43900 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRICKLE3O43900 SERBP1P1-201ENST00000396021 1160 ntBASIC21.53■■□□□ 1.04
PRICKLE3O43900 AC096631.2-201ENST00000436136 790 ntBASIC21.53■■□□□ 1.04
PRICKLE3O43900 AC110285.6-201ENST00000617652 491 ntBASIC21.53■■□□□ 1.04
PRICKLE3O43900 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.53■■□□□ 1.04
PRICKLE3O43900 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PRICKLE3O43900 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRICKLE3O43900 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.53■■□□□ 1.04
PRICKLE3O43900 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRICKLE3O43900 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRICKLE3O43900 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRICKLE3O43900 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.52■■□□□ 1.04
PRICKLE3O43900 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRICKLE3O43900 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRICKLE3O43900 MIR3181-201ENST00000578512 73 ntBASIC21.52■■□□□ 1.04
PRICKLE3O43900 AL499627.2-201ENST00000606283 725 ntBASIC21.52■■□□□ 1.04
PRICKLE3O43900 AL353803.4-201ENST00000565882 1934 ntBASIC21.52■■□□□ 1.04
PRICKLE3O43900 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.52■■□□□ 1.04
PRICKLE3O43900 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
PRICKLE3O43900 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.52■■□□□ 1.03
PRICKLE3O43900 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PRICKLE3O43900 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRICKLE3O43900 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRICKLE3O43900 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRICKLE3O43900 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRICKLE3O43900 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PRICKLE3O43900 SYT6-210ENST00000641643 1587 ntBASIC21.51■■□□□ 1.03
PRICKLE3O43900 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PRICKLE3O43900 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PRICKLE3O43900 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE3O43900 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.5■■□□□ 1.03
PRICKLE3O43900 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE3O43900 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE3O43900 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.5■■□□□ 1.03
PRICKLE3O43900 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.5■■□□□ 1.03
PRICKLE3O43900 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.5■■□□□ 1.03
PRICKLE3O43900 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE3O43900 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRICKLE3O43900 AL138724.1-201ENST00000606771 1088 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms