Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC2O43543 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC2O43543 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
XRCC2O43543 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC2O43543 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC2O43543 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.41■□□□□ 0.7
XRCC2O43543 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
XRCC2O43543 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC2O43543 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.41■□□□□ 0.7
XRCC2O43543 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.41■□□□□ 0.7
XRCC2O43543 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.41■□□□□ 0.7
XRCC2O43543 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.41■□□□□ 0.7
XRCC2O43543 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
XRCC2O43543 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC2O43543 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC2O43543 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC2O43543 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC2O43543 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.4■□□□□ 0.7
XRCC2O43543 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC2O43543 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC2O43543 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.4■□□□□ 0.7
XRCC2O43543 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC2O43543 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC2O43543 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
XRCC2O43543 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
XRCC2O43543 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.4■□□□□ 0.7
XRCC2O43543 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
XRCC2O43543 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
XRCC2O43543 AC010997.5-201ENST00000609182 354 ntBASIC19.39■□□□□ 0.69
XRCC2O43543 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
XRCC2O43543 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
XRCC2O43543 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.39■□□□□ 0.69
XRCC2O43543 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC2O43543 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.38■□□□□ 0.69
XRCC2O43543 TSPY9P-201ENST00000440215 945 ntBASIC19.38■□□□□ 0.69
XRCC2O43543 TSPY11P-201ENST00000442607 1045 ntBASIC19.38■□□□□ 0.69
XRCC2O43543 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.38■□□□□ 0.69
XRCC2O43543 AC144652.1-201ENST00000609974 1624 ntBASIC19.38■□□□□ 0.69
XRCC2O43543 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
XRCC2O43543 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC2O43543 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
XRCC2O43543 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.37■□□□□ 0.69
XRCC2O43543 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.37■□□□□ 0.69
XRCC2O43543 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.37■□□□□ 0.69
XRCC2O43543 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.37■□□□□ 0.69
XRCC2O43543 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.37■□□□□ 0.69
XRCC2O43543 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
XRCC2O43543 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC2O43543 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC2O43543 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC2O43543 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC2O43543 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.36■□□□□ 0.69
XRCC2O43543 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC2O43543 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.36■□□□□ 0.69
XRCC2O43543 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.36■□□□□ 0.69
XRCC2O43543 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC2O43543 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
XRCC2O43543 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.35■□□□□ 0.69
XRCC2O43543 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
XRCC2O43543 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.35■□□□□ 0.69
XRCC2O43543 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.35■□□□□ 0.69
XRCC2O43543 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
XRCC2O43543 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.34■□□□□ 0.69
XRCC2O43543 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC2O43543 AL353803.4-201ENST00000565882 1934 ntBASIC19.34■□□□□ 0.69
XRCC2O43543 AC079834.2-201ENST00000609776 1949 ntBASIC19.34■□□□□ 0.69
XRCC2O43543 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
XRCC2O43543 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.34■□□□□ 0.69
XRCC2O43543 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
XRCC2O43543 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC2O43543 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC2O43543 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC2O43543 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
XRCC2O43543 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
XRCC2O43543 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
XRCC2O43543 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
XRCC2O43543 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.33■□□□□ 0.69
XRCC2O43543 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.33■□□□□ 0.69
XRCC2O43543 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms