Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 AC010980.1-201ENST00000587192 1142 ntBASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 PVT1_1.1-201ENST00000615125 194 ntBASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 LINC00526-201ENST00000581067 1875 ntBASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF103-CHMP3A0A140T963 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF103-CHMP3A0A140T963 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF103-CHMP3A0A140T963 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF103-CHMP3A0A140T963 ANOS2P-203ENST00000472227 1816 ntBASIC21.45■■□□□ 1.02
RNF103-CHMP3A0A140T963 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF103-CHMP3A0A140T963 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF103-CHMP3A0A140T963 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF103-CHMP3A0A140T963 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF103-CHMP3A0A140T963 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF103-CHMP3A0A140T963 AC012354.3-201ENST00000623734 483 ntBASIC21.44■■□□□ 1.02
RNF103-CHMP3A0A140T963 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF103-CHMP3A0A140T963 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF103-CHMP3A0A140T963 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 THA1P-201ENST00000590384 1145 ntBASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 GUSBP5-202ENST00000510805 1989 ntBASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF103-CHMP3A0A140T963 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 AC127496.7-201ENST00000625110 1798 ntBASIC21.42■■□□□ 1.02
RNF103-CHMP3A0A140T963 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 MIR4281-201ENST00000580852 62 ntBASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RNF103-CHMP3A0A140T963 ALDH1A3-203ENST00000557963 1670 ntBASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 AC137767.1-201ENST00000602918 1920 ntBASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 KRT18P24-201ENST00000344739 1156 ntBASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF103-CHMP3A0A140T963 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF103-CHMP3A0A140T963 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms