Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 AL353803.4-201ENST00000565882 1934 ntBASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV24A0A0B4J272 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 AC079834.2-201ENST00000609776 1949 ntBASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 AL117328.2-201ENST00000624617 1940 ntBASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV24A0A0B4J272 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV24A0A0B4J272 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV24A0A0B4J272 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV24A0A0B4J272 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRAV24A0A0B4J272 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV24A0A0B4J272 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV24A0A0B4J272 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV24A0A0B4J272 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
TRAV24A0A0B4J272 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 RARRES2P1-201ENST00000474487 481 ntBASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV24A0A0B4J272 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV24A0A0B4J272 AC005703.6-201ENST00000623265 1329 ntBASIC18.77■□□□□ 0.6
TRAV24A0A0B4J272 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV24A0A0B4J272 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV24A0A0B4J272 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV24A0A0B4J272 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV24A0A0B4J272 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
TRAV24A0A0B4J272 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV24A0A0B4J272 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 AC144652.1-201ENST00000609974 1624 ntBASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 AC092028.1-203ENST00000608262 953 ntBASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV24A0A0B4J272 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 Z92544.1-202ENST00000571933 1220 ntBASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV24A0A0B4J272 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 KRT125P-201ENST00000546827 989 ntBASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV24A0A0B4J272 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms