Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.43■■■□□ 2.62
KDM3AQ9Y4C1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
KDM3AQ9Y4C1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
KDM3AQ9Y4C1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
KDM3AQ9Y4C1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.4■■■□□ 2.62
KDM3AQ9Y4C1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.4■■■□□ 2.62
KDM3AQ9Y4C1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
KDM3AQ9Y4C1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.39■■■□□ 2.62
KDM3AQ9Y4C1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.38■■■□□ 2.61
KDM3AQ9Y4C1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
KDM3AQ9Y4C1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.35■■■□□ 2.61
KDM3AQ9Y4C1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.35■■■□□ 2.61
KDM3AQ9Y4C1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.35■■■□□ 2.61
KDM3AQ9Y4C1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
KDM3AQ9Y4C1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
KDM3AQ9Y4C1 SETD8P1-201ENST00000623146 1180 ntBASIC31.29■■■□□ 2.6
KDM3AQ9Y4C1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.29■■■□□ 2.6
KDM3AQ9Y4C1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.27■■■□□ 2.6
KDM3AQ9Y4C1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
KDM3AQ9Y4C1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
KDM3AQ9Y4C1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
KDM3AQ9Y4C1 AC097358.2-201ENST00000607541 1159 ntBASIC31.26■■■□□ 2.6
KDM3AQ9Y4C1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
KDM3AQ9Y4C1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.25■■■□□ 2.59
KDM3AQ9Y4C1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.25■■■□□ 2.59
KDM3AQ9Y4C1 AC136428.2-201ENST00000563187 214 ntBASIC31.24■■■□□ 2.59
KDM3AQ9Y4C1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
KDM3AQ9Y4C1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
KDM3AQ9Y4C1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.24■■■□□ 2.59
KDM3AQ9Y4C1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
KDM3AQ9Y4C1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.21■■■□□ 2.59
KDM3AQ9Y4C1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
KDM3AQ9Y4C1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
KDM3AQ9Y4C1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
KDM3AQ9Y4C1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
KDM3AQ9Y4C1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
KDM3AQ9Y4C1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.19■■■□□ 2.58
KDM3AQ9Y4C1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
KDM3AQ9Y4C1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
KDM3AQ9Y4C1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
KDM3AQ9Y4C1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
KDM3AQ9Y4C1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
KDM3AQ9Y4C1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.12■■■□□ 2.57
KDM3AQ9Y4C1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.1■■■□□ 2.57
KDM3AQ9Y4C1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.1■■■□□ 2.57
KDM3AQ9Y4C1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
KDM3AQ9Y4C1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.09■■■□□ 2.57
KDM3AQ9Y4C1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.07■■■□□ 2.56
KDM3AQ9Y4C1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
KDM3AQ9Y4C1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.07■■■□□ 2.56
KDM3AQ9Y4C1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
KDM3AQ9Y4C1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.06■■■□□ 2.56
KDM3AQ9Y4C1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
KDM3AQ9Y4C1 SUZ12P1-203ENST00000578195 985 ntBASIC31.05■■■□□ 2.56
KDM3AQ9Y4C1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.02■■■□□ 2.56
KDM3AQ9Y4C1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
KDM3AQ9Y4C1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
KDM3AQ9Y4C1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.01■■■□□ 2.56
KDM3AQ9Y4C1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
KDM3AQ9Y4C1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.99■■■□□ 2.55
KDM3AQ9Y4C1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
KDM3AQ9Y4C1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.93■■■□□ 2.54
KDM3AQ9Y4C1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
KDM3AQ9Y4C1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.92■■■□□ 2.54
KDM3AQ9Y4C1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
KDM3AQ9Y4C1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.92■■■□□ 2.54
KDM3AQ9Y4C1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
KDM3AQ9Y4C1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
KDM3AQ9Y4C1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
KDM3AQ9Y4C1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
KDM3AQ9Y4C1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.89■■■□□ 2.54
KDM3AQ9Y4C1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
KDM3AQ9Y4C1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
KDM3AQ9Y4C1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.86■■■□□ 2.53
KDM3AQ9Y4C1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
KDM3AQ9Y4C1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
KDM3AQ9Y4C1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
KDM3AQ9Y4C1 CAHM-201ENST00000604200 896 ntBASIC30.84■■■□□ 2.53
KDM3AQ9Y4C1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.84■■■□□ 2.53
KDM3AQ9Y4C1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
KDM3AQ9Y4C1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
KDM3AQ9Y4C1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
KDM3AQ9Y4C1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.83■■■□□ 2.53
KDM3AQ9Y4C1 AL133380.1-201ENST00000506013 324 ntBASIC30.82■■■□□ 2.52
KDM3AQ9Y4C1 AC120057.4-201ENST00000624722 1615 ntBASIC30.82■■■□□ 2.52
KDM3AQ9Y4C1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
KDM3AQ9Y4C1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
KDM3AQ9Y4C1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
KDM3AQ9Y4C1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
KDM3AQ9Y4C1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
KDM3AQ9Y4C1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
KDM3AQ9Y4C1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
KDM3AQ9Y4C1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
KDM3AQ9Y4C1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
KDM3AQ9Y4C1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
KDM3AQ9Y4C1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
KDM3AQ9Y4C1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
KDM3AQ9Y4C1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
KDM3AQ9Y4C1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.78■■■□□ 2.52
KDM3AQ9Y4C1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms