Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42SE2Q9NRR3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC42SE2Q9NRR3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CDC42SE2Q9NRR3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDC42SE2Q9NRR3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.14■□□□□ 0.65
CDC42SE2Q9NRR3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CDC42SE2Q9NRR3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.13■□□□□ 0.65
CDC42SE2Q9NRR3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42SE2Q9NRR3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42SE2Q9NRR3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC42SE2Q9NRR3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC42SE2Q9NRR3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.11■□□□□ 0.65
CDC42SE2Q9NRR3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.1■□□□□ 0.65
CDC42SE2Q9NRR3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.09■□□□□ 0.65
CDC42SE2Q9NRR3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.09■□□□□ 0.65
CDC42SE2Q9NRR3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42SE2Q9NRR3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42SE2Q9NRR3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.07■□□□□ 0.64
CDC42SE2Q9NRR3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42SE2Q9NRR3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDC42SE2Q9NRR3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.05■□□□□ 0.64
CDC42SE2Q9NRR3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.05■□□□□ 0.64
CDC42SE2Q9NRR3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42SE2Q9NRR3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.03■□□□□ 0.64
CDC42SE2Q9NRR3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC42SE2Q9NRR3 AC120057.4-201ENST00000624722 1615 ntBASIC19.01■□□□□ 0.63
CDC42SE2Q9NRR3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC42SE2Q9NRR3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.99■□□□□ 0.63
CDC42SE2Q9NRR3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42SE2Q9NRR3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42SE2Q9NRR3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42SE2Q9NRR3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42SE2Q9NRR3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.97■□□□□ 0.63
CDC42SE2Q9NRR3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42SE2Q9NRR3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDC42SE2Q9NRR3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.96■□□□□ 0.63
CDC42SE2Q9NRR3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC42SE2Q9NRR3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CDC42SE2Q9NRR3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42SE2Q9NRR3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42SE2Q9NRR3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC42SE2Q9NRR3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42SE2Q9NRR3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42SE2Q9NRR3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC42SE2Q9NRR3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDC42SE2Q9NRR3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC42SE2Q9NRR3 AC006077.2-201ENST00000623591 457 ntBASIC18.91■□□□□ 0.62
CDC42SE2Q9NRR3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC42SE2Q9NRR3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC42SE2Q9NRR3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDC42SE2Q9NRR3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.89■□□□□ 0.61
CDC42SE2Q9NRR3 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.89■□□□□ 0.61
CDC42SE2Q9NRR3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CDC42SE2Q9NRR3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC42SE2Q9NRR3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC42SE2Q9NRR3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC42SE2Q9NRR3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDC42SE2Q9NRR3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42SE2Q9NRR3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.86■□□□□ 0.61
CDC42SE2Q9NRR3 ABCB10P1-201ENST00000614297 2181 ntBASIC18.86■□□□□ 0.61
CDC42SE2Q9NRR3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42SE2Q9NRR3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42SE2Q9NRR3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.85■□□□□ 0.61
CDC42SE2Q9NRR3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42SE2Q9NRR3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42SE2Q9NRR3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.84■□□□□ 0.61
CDC42SE2Q9NRR3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42SE2Q9NRR3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.83■□□□□ 0.6
CDC42SE2Q9NRR3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42SE2Q9NRR3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42SE2Q9NRR3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.8■□□□□ 0.6
CDC42SE2Q9NRR3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42SE2Q9NRR3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42SE2Q9NRR3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42SE2Q9NRR3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42SE2Q9NRR3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42SE2Q9NRR3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CDC42SE2Q9NRR3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42SE2Q9NRR3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42SE2Q9NRR3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42SE2Q9NRR3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42SE2Q9NRR3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC42SE2Q9NRR3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42SE2Q9NRR3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC42SE2Q9NRR3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.76■□□□□ 0.59
CDC42SE2Q9NRR3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42SE2Q9NRR3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC42SE2Q9NRR3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42SE2Q9NRR3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42SE2Q9NRR3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC42SE2Q9NRR3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC42SE2Q9NRR3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDC42SE2Q9NRR3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDC42SE2Q9NRR3 ZNRF2P1-201ENST00000441407 443 ntBASIC18.72■□□□□ 0.59
CDC42SE2Q9NRR3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.71■□□□□ 0.59
CDC42SE2Q9NRR3 ABCB10P3-201ENST00000561950 2166 ntBASIC18.71■□□□□ 0.59
CDC42SE2Q9NRR3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDC42SE2Q9NRR3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.7■□□□□ 0.58
CDC42SE2Q9NRR3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.69■□□□□ 0.58
CDC42SE2Q9NRR3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms