Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
EFCC1Q9HA90 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
EFCC1Q9HA90 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
EFCC1Q9HA90 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
EFCC1Q9HA90 AL391121.1-201ENST00000607967 1349 ntBASIC32.86■■■□□ 2.85
EFCC1Q9HA90 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.83■■■□□ 2.85
EFCC1Q9HA90 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
EFCC1Q9HA90 AC145285.7-201ENST00000614819 1539 ntBASIC32.82■■■□□ 2.85
EFCC1Q9HA90 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.8■■■□□ 2.84
EFCC1Q9HA90 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
EFCC1Q9HA90 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.79■■■□□ 2.84
EFCC1Q9HA90 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.79■■■□□ 2.84
EFCC1Q9HA90 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
EFCC1Q9HA90 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
EFCC1Q9HA90 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.77■■■□□ 2.84
EFCC1Q9HA90 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
EFCC1Q9HA90 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
EFCC1Q9HA90 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.73■■■□□ 2.83
EFCC1Q9HA90 MIR3665-201ENST00000578708 105 ntBASIC32.69■■■□□ 2.82
EFCC1Q9HA90 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.68■■■□□ 2.82
EFCC1Q9HA90 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
EFCC1Q9HA90 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.67■■■□□ 2.82
EFCC1Q9HA90 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
EFCC1Q9HA90 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.66■■■□□ 2.82
EFCC1Q9HA90 HLA-V-202ENST00000446817 847 ntBASIC32.66■■■□□ 2.82
EFCC1Q9HA90 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
EFCC1Q9HA90 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
EFCC1Q9HA90 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.65■■■□□ 2.82
EFCC1Q9HA90 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.64■■■□□ 2.82
EFCC1Q9HA90 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
EFCC1Q9HA90 AL133380.1-201ENST00000506013 324 ntBASIC32.6■■■□□ 2.81
EFCC1Q9HA90 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
EFCC1Q9HA90 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
EFCC1Q9HA90 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.57■■■□□ 2.8
EFCC1Q9HA90 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
EFCC1Q9HA90 AC087741.3-201ENST00000624270 1347 ntBASIC32.54■■■□□ 2.8
EFCC1Q9HA90 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.54■■■□□ 2.8
EFCC1Q9HA90 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.53■■■□□ 2.8
EFCC1Q9HA90 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
EFCC1Q9HA90 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
EFCC1Q9HA90 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.5■■■□□ 2.79
EFCC1Q9HA90 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
EFCC1Q9HA90 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
EFCC1Q9HA90 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
EFCC1Q9HA90 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.47■■■□□ 2.79
EFCC1Q9HA90 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
EFCC1Q9HA90 DUX4L28-201ENST00000623687 678 ntBASIC32.44■■■□□ 2.78
EFCC1Q9HA90 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.43■■■□□ 2.78
EFCC1Q9HA90 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
EFCC1Q9HA90 AC044849.2-201ENST00000606596 710 ntBASIC32.42■■■□□ 2.78
EFCC1Q9HA90 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
EFCC1Q9HA90 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
EFCC1Q9HA90 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.78
EFCC1Q9HA90 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.39■■■□□ 2.78
EFCC1Q9HA90 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
EFCC1Q9HA90 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.37■■■□□ 2.77
EFCC1Q9HA90 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.35■■■□□ 2.77
EFCC1Q9HA90 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
EFCC1Q9HA90 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
EFCC1Q9HA90 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.33■■■□□ 2.77
EFCC1Q9HA90 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.33■■■□□ 2.77
EFCC1Q9HA90 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
EFCC1Q9HA90 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.28■■■□□ 2.76
EFCC1Q9HA90 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.27■■■□□ 2.76
EFCC1Q9HA90 MIR762-201ENST00000390236 83 ntBASIC32.27■■■□□ 2.76
EFCC1Q9HA90 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.26■■■□□ 2.76
EFCC1Q9HA90 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.26■■■□□ 2.75
EFCC1Q9HA90 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.26■■■□□ 2.75
EFCC1Q9HA90 AC005559.1-201ENST00000589661 871 ntBASIC32.25■■■□□ 2.75
EFCC1Q9HA90 ZNRF2P2-203ENST00000454624 420 ntBASIC32.23■■■□□ 2.75
EFCC1Q9HA90 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
EFCC1Q9HA90 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.22■■■□□ 2.75
EFCC1Q9HA90 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.22■■■□□ 2.75
EFCC1Q9HA90 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.22■■■□□ 2.75
EFCC1Q9HA90 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.19■■■□□ 2.74
EFCC1Q9HA90 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
EFCC1Q9HA90 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.18■■■□□ 2.74
EFCC1Q9HA90 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
EFCC1Q9HA90 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
EFCC1Q9HA90 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.15■■■□□ 2.74
EFCC1Q9HA90 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
EFCC1Q9HA90 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
EFCC1Q9HA90 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
EFCC1Q9HA90 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.13■■■□□ 2.73
EFCC1Q9HA90 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
EFCC1Q9HA90 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.12■■■□□ 2.73
EFCC1Q9HA90 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
EFCC1Q9HA90 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
EFCC1Q9HA90 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.1■■■□□ 2.73
EFCC1Q9HA90 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.09■■■□□ 2.73
EFCC1Q9HA90 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
EFCC1Q9HA90 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.07■■■□□ 2.72
EFCC1Q9HA90 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.07■■■□□ 2.72
EFCC1Q9HA90 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
EFCC1Q9HA90 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
EFCC1Q9HA90 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
EFCC1Q9HA90 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.06■■■□□ 2.72
EFCC1Q9HA90 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
EFCC1Q9HA90 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
EFCC1Q9HA90 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms