Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
SDF4Q9BRK5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.07■■■□□ 2.72
SDF4Q9BRK5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SDF4Q9BRK5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SDF4Q9BRK5 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
SDF4Q9BRK5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
SDF4Q9BRK5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SDF4Q9BRK5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SDF4Q9BRK5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.02■■■□□ 2.72
SDF4Q9BRK5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.02■■■□□ 2.72
SDF4Q9BRK5 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.01■■■□□ 2.71
SDF4Q9BRK5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.01■■■□□ 2.71
SDF4Q9BRK5 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SDF4Q9BRK5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SDF4Q9BRK5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SDF4Q9BRK5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
SDF4Q9BRK5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
SDF4Q9BRK5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SDF4Q9BRK5 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
SDF4Q9BRK5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
SDF4Q9BRK5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.91■■■□□ 2.7
SDF4Q9BRK5 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SDF4Q9BRK5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.9■■■□□ 2.7
SDF4Q9BRK5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.89■■■□□ 2.7
SDF4Q9BRK5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
SDF4Q9BRK5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SDF4Q9BRK5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SDF4Q9BRK5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
SDF4Q9BRK5 RARRES2P7-201ENST00000567349 469 ntBASIC31.86■■■□□ 2.69
SDF4Q9BRK5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
SDF4Q9BRK5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SDF4Q9BRK5 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SDF4Q9BRK5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.84■■■□□ 2.69
SDF4Q9BRK5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
SDF4Q9BRK5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.83■■■□□ 2.69
SDF4Q9BRK5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SDF4Q9BRK5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SDF4Q9BRK5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.78■■■□□ 2.68
SDF4Q9BRK5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.78■■■□□ 2.68
SDF4Q9BRK5 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SDF4Q9BRK5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.74■■■□□ 2.67
SDF4Q9BRK5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SDF4Q9BRK5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SDF4Q9BRK5 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SDF4Q9BRK5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
SDF4Q9BRK5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.72■■■□□ 2.67
SDF4Q9BRK5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SDF4Q9BRK5 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
SDF4Q9BRK5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
SDF4Q9BRK5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SDF4Q9BRK5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SDF4Q9BRK5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SDF4Q9BRK5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.67■■■□□ 2.66
SDF4Q9BRK5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.66■■■□□ 2.66
SDF4Q9BRK5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.66■■■□□ 2.66
SDF4Q9BRK5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.64■■■□□ 2.66
SDF4Q9BRK5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.64■■■□□ 2.66
SDF4Q9BRK5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
SDF4Q9BRK5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SDF4Q9BRK5 SETD8P1-201ENST00000623146 1180 ntBASIC31.62■■■□□ 2.65
SDF4Q9BRK5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
SDF4Q9BRK5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SDF4Q9BRK5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
SDF4Q9BRK5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SDF4Q9BRK5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
SDF4Q9BRK5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
SDF4Q9BRK5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SDF4Q9BRK5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
SDF4Q9BRK5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SDF4Q9BRK5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.58■■■□□ 2.65
SDF4Q9BRK5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.58■■■□□ 2.65
SDF4Q9BRK5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.58■■■□□ 2.65
SDF4Q9BRK5 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SDF4Q9BRK5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SDF4Q9BRK5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SDF4Q9BRK5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SDF4Q9BRK5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.54■■■□□ 2.64
SDF4Q9BRK5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SDF4Q9BRK5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.52■■■□□ 2.64
SDF4Q9BRK5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SDF4Q9BRK5 AC097358.2-201ENST00000607541 1159 ntBASIC31.52■■■□□ 2.64
SDF4Q9BRK5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SDF4Q9BRK5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
SDF4Q9BRK5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SDF4Q9BRK5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.48■■■□□ 2.63
SDF4Q9BRK5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.47■■■□□ 2.63
SDF4Q9BRK5 AC136428.2-201ENST00000563187 214 ntBASIC31.45■■■□□ 2.63
SDF4Q9BRK5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
SDF4Q9BRK5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.41■■■□□ 2.62
SDF4Q9BRK5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SDF4Q9BRK5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.41■■■□□ 2.62
SDF4Q9BRK5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SDF4Q9BRK5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.39■■■□□ 2.62
SDF4Q9BRK5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SDF4Q9BRK5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SDF4Q9BRK5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SDF4Q9BRK5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.38■■■□□ 2.61
SDF4Q9BRK5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
SDF4Q9BRK5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SDF4Q9BRK5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms