Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC36.55■■■■□ 3.44
TUBGCP6Q96RT7 MIR7108-201ENST00000614319 87 ntBASIC36.55■■■■□ 3.44
TUBGCP6Q96RT7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
TUBGCP6Q96RT7 AL133380.1-201ENST00000506013 324 ntBASIC36.54■■■■□ 3.44
TUBGCP6Q96RT7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
TUBGCP6Q96RT7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC36.53■■■■□ 3.44
TUBGCP6Q96RT7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC36.48■■■■□ 3.43
TUBGCP6Q96RT7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC36.48■■■■□ 3.43
TUBGCP6Q96RT7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
TUBGCP6Q96RT7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC36.47■■■■□ 3.43
TUBGCP6Q96RT7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
TUBGCP6Q96RT7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
TUBGCP6Q96RT7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
TUBGCP6Q96RT7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
TUBGCP6Q96RT7 HLA-V-202ENST00000446817 847 ntBASIC36.44■■■■□ 3.42
TUBGCP6Q96RT7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC36.43■■■■□ 3.42
TUBGCP6Q96RT7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
TUBGCP6Q96RT7 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.41■■■■□ 3.42
TUBGCP6Q96RT7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.4■■■■□ 3.42
TUBGCP6Q96RT7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
TUBGCP6Q96RT7 DUX4L28-201ENST00000623687 678 ntBASIC36.38■■■■□ 3.42
TUBGCP6Q96RT7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
TUBGCP6Q96RT7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC36.37■■■■□ 3.41
TUBGCP6Q96RT7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.36■■■■□ 3.41
TUBGCP6Q96RT7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC36.34■■■■□ 3.41
TUBGCP6Q96RT7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC36.34■■■■□ 3.41
TUBGCP6Q96RT7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
TUBGCP6Q96RT7 ABHD17AP4-201ENST00000411545 909 ntBASIC36.33■■■■□ 3.41
TUBGCP6Q96RT7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC36.32■■■■□ 3.41
TUBGCP6Q96RT7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC36.32■■■■□ 3.4
TUBGCP6Q96RT7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC36.32■■■■□ 3.4
TUBGCP6Q96RT7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC36.31■■■■□ 3.4
TUBGCP6Q96RT7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC36.29■■■■□ 3.4
TUBGCP6Q96RT7 AC087741.3-201ENST00000624270 1347 ntBASIC36.28■■■■□ 3.4
TUBGCP6Q96RT7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.28■■■■□ 3.4
TUBGCP6Q96RT7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
TUBGCP6Q96RT7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
TUBGCP6Q96RT7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC36.27■■■■□ 3.4
TUBGCP6Q96RT7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.27■■■■□ 3.4
TUBGCP6Q96RT7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC36.26■■■■□ 3.39
TUBGCP6Q96RT7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
TUBGCP6Q96RT7 MIR3665-201ENST00000578708 105 ntBASIC36.24■■■■□ 3.39
TUBGCP6Q96RT7 AC044849.2-201ENST00000606596 710 ntBASIC36.22■■■■□ 3.39
TUBGCP6Q96RT7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC36.22■■■■□ 3.39
TUBGCP6Q96RT7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC36.21■■■■□ 3.39
TUBGCP6Q96RT7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
TUBGCP6Q96RT7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC36.19■■■■□ 3.38
TUBGCP6Q96RT7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC36.18■■■■□ 3.38
TUBGCP6Q96RT7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
TUBGCP6Q96RT7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
TUBGCP6Q96RT7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC36.13■■■■□ 3.37
TUBGCP6Q96RT7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC36.13■■■■□ 3.37
TUBGCP6Q96RT7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC36.1■■■■□ 3.37
TUBGCP6Q96RT7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
TUBGCP6Q96RT7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC36.08■■■■□ 3.37
TUBGCP6Q96RT7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC36.06■■■■□ 3.36
TUBGCP6Q96RT7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC36.04■■■■□ 3.36
TUBGCP6Q96RT7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
TUBGCP6Q96RT7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC36.02■■■■□ 3.36
TUBGCP6Q96RT7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC36.02■■■■□ 3.36
TUBGCP6Q96RT7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC36■■■■□ 3.35
TUBGCP6Q96RT7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
TUBGCP6Q96RT7 AC005559.1-201ENST00000589661 871 ntBASIC35.98■■■■□ 3.35
TUBGCP6Q96RT7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC35.97■■■■□ 3.35
TUBGCP6Q96RT7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
TUBGCP6Q96RT7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
TUBGCP6Q96RT7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC35.94■■■■□ 3.34
TUBGCP6Q96RT7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC35.93■■■■□ 3.34
TUBGCP6Q96RT7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC35.93■■■■□ 3.34
TUBGCP6Q96RT7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
TUBGCP6Q96RT7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
TUBGCP6Q96RT7 MIR762-201ENST00000390236 83 ntBASIC35.9■■■■□ 3.34
TUBGCP6Q96RT7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.9■■■■□ 3.34
TUBGCP6Q96RT7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
TUBGCP6Q96RT7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.89■■■■□ 3.34
TUBGCP6Q96RT7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC35.87■■■■□ 3.33
TUBGCP6Q96RT7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC35.87■■■■□ 3.33
TUBGCP6Q96RT7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC35.87■■■■□ 3.33
TUBGCP6Q96RT7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
TUBGCP6Q96RT7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
TUBGCP6Q96RT7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
TUBGCP6Q96RT7 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.84■■■■□ 3.33
TUBGCP6Q96RT7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.81■■■■□ 3.32
TUBGCP6Q96RT7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
TUBGCP6Q96RT7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC35.8■■■■□ 3.32
TUBGCP6Q96RT7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC35.8■■■■□ 3.32
TUBGCP6Q96RT7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
TUBGCP6Q96RT7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC35.76■■■■□ 3.31
TUBGCP6Q96RT7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
TUBGCP6Q96RT7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.73■■■■□ 3.31
TUBGCP6Q96RT7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
TUBGCP6Q96RT7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
TUBGCP6Q96RT7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.7■■■■□ 3.31
TUBGCP6Q96RT7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.69■■■■□ 3.3
TUBGCP6Q96RT7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC35.69■■■■□ 3.3
TUBGCP6Q96RT7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
TUBGCP6Q96RT7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.67■■■■□ 3.3
TUBGCP6Q96RT7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC35.67■■■■□ 3.3
TUBGCP6Q96RT7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
TUBGCP6Q96RT7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC35.66■■■■□ 3.3
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms