Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SLC6A18Q96N87 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.88■■■□□ 2.05
SLC6A18Q96N87 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
SLC6A18Q96N87 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SLC6A18Q96N87 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SLC6A18Q96N87 AL133380.1-201ENST00000506013 324 ntBASIC27.82■■■□□ 2.04
SLC6A18Q96N87 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SLC6A18Q96N87 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.81■■■□□ 2.04
SLC6A18Q96N87 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SLC6A18Q96N87 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SLC6A18Q96N87 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
SLC6A18Q96N87 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.77■■■□□ 2.04
SLC6A18Q96N87 AL391121.1-201ENST00000607967 1349 ntBASIC27.77■■■□□ 2.04
SLC6A18Q96N87 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SLC6A18Q96N87 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SLC6A18Q96N87 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SLC6A18Q96N87 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SLC6A18Q96N87 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.75■■■□□ 2.03
SLC6A18Q96N87 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SLC6A18Q96N87 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SLC6A18Q96N87 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SLC6A18Q96N87 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.72■■■□□ 2.03
SLC6A18Q96N87 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
SLC6A18Q96N87 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.68■■■□□ 2.02
SLC6A18Q96N87 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.68■■■□□ 2.02
SLC6A18Q96N87 AL162393.1-201ENST00000437852 946 ntBASIC27.66■■■□□ 2.02
SLC6A18Q96N87 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.66■■■□□ 2.02
SLC6A18Q96N87 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.02
SLC6A18Q96N87 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
SLC6A18Q96N87 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SLC6A18Q96N87 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SLC6A18Q96N87 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.62■■■□□ 2.01
SLC6A18Q96N87 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.61■■■□□ 2.01
SLC6A18Q96N87 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.59■■■□□ 2.01
SLC6A18Q96N87 AP006261.1-201ENST00000584783 668 ntBASIC27.59■■■□□ 2.01
SLC6A18Q96N87 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
SLC6A18Q96N87 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SLC6A18Q96N87 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.57■■■□□ 2
SLC6A18Q96N87 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.56■■■□□ 2
SLC6A18Q96N87 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.56■■■□□ 2
SLC6A18Q96N87 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.55■■■□□ 2
SLC6A18Q96N87 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SLC6A18Q96N87 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
SLC6A18Q96N87 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SLC6A18Q96N87 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.54■■■□□ 2
SLC6A18Q96N87 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.53■■■□□ 2
SLC6A18Q96N87 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.53■■■□□ 2
SLC6A18Q96N87 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.53■■■□□ 2
SLC6A18Q96N87 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC6A18Q96N87 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.52■■■□□ 2
SLC6A18Q96N87 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.51■■□□□ 1.99
SLC6A18Q96N87 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
SLC6A18Q96N87 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.49■■□□□ 1.99
SLC6A18Q96N87 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SLC6A18Q96N87 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
SLC6A18Q96N87 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SLC6A18Q96N87 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.43■■□□□ 1.98
SLC6A18Q96N87 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SLC6A18Q96N87 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SLC6A18Q96N87 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
SLC6A18Q96N87 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SLC6A18Q96N87 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SLC6A18Q96N87 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.4■■□□□ 1.98
SLC6A18Q96N87 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SLC6A18Q96N87 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.38■■□□□ 1.97
SLC6A18Q96N87 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
SLC6A18Q96N87 MIR3665-201ENST00000578708 105 ntBASIC27.38■■□□□ 1.97
SLC6A18Q96N87 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SLC6A18Q96N87 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.34■■□□□ 1.97
SLC6A18Q96N87 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC6A18Q96N87 MIR762-201ENST00000390236 83 ntBASIC27.33■■□□□ 1.97
SLC6A18Q96N87 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SLC6A18Q96N87 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.33■■□□□ 1.97
SLC6A18Q96N87 DUX4L28-201ENST00000623687 678 ntBASIC27.33■■□□□ 1.97
SLC6A18Q96N87 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC6A18Q96N87 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.32■■□□□ 1.96
SLC6A18Q96N87 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.31■■□□□ 1.96
SLC6A18Q96N87 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SLC6A18Q96N87 AC087741.3-201ENST00000624270 1347 ntBASIC27.28■■□□□ 1.96
SLC6A18Q96N87 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.28■■□□□ 1.96
SLC6A18Q96N87 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SLC6A18Q96N87 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SLC6A18Q96N87 AC005559.1-201ENST00000589661 871 ntBASIC27.24■■□□□ 1.95
SLC6A18Q96N87 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SLC6A18Q96N87 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.23■■□□□ 1.95
SLC6A18Q96N87 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SLC6A18Q96N87 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SLC6A18Q96N87 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SLC6A18Q96N87 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.22■■□□□ 1.95
SLC6A18Q96N87 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SLC6A18Q96N87 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.19■■□□□ 1.94
SLC6A18Q96N87 WASH5P-204ENST00000632292 975 ntBASIC27.19■■□□□ 1.94
SLC6A18Q96N87 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC6A18Q96N87 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC6A18Q96N87 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC6A18Q96N87 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SLC6A18Q96N87 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SLC6A18Q96N87 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SLC6A18Q96N87 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SLC6A18Q96N87 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms