Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
VTI1AQ96AJ9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
VTI1AQ96AJ9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
VTI1AQ96AJ9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
VTI1AQ96AJ9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
VTI1AQ96AJ9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
VTI1AQ96AJ9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.55■■■□□ 2.64
VTI1AQ96AJ9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
VTI1AQ96AJ9 AL162393.1-201ENST00000437852 946 ntBASIC31.54■■■□□ 2.64
VTI1AQ96AJ9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VTI1AQ96AJ9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VTI1AQ96AJ9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.53■■■□□ 2.64
VTI1AQ96AJ9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
VTI1AQ96AJ9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
VTI1AQ96AJ9 AL391121.1-201ENST00000607967 1349 ntBASIC31.51■■■□□ 2.64
VTI1AQ96AJ9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
VTI1AQ96AJ9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
VTI1AQ96AJ9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
VTI1AQ96AJ9 AP006261.1-201ENST00000584783 668 ntBASIC31.48■■■□□ 2.63
VTI1AQ96AJ9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
VTI1AQ96AJ9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
VTI1AQ96AJ9 AL133380.1-201ENST00000506013 324 ntBASIC31.44■■■□□ 2.62
VTI1AQ96AJ9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.44■■■□□ 2.62
VTI1AQ96AJ9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.42■■■□□ 2.62
VTI1AQ96AJ9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
VTI1AQ96AJ9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
VTI1AQ96AJ9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.38■■■□□ 2.61
VTI1AQ96AJ9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VTI1AQ96AJ9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.38■■■□□ 2.61
VTI1AQ96AJ9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
VTI1AQ96AJ9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.37■■■□□ 2.61
VTI1AQ96AJ9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
VTI1AQ96AJ9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
VTI1AQ96AJ9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
VTI1AQ96AJ9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.34■■■□□ 2.61
VTI1AQ96AJ9 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.34■■■□□ 2.61
VTI1AQ96AJ9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
VTI1AQ96AJ9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.32■■■□□ 2.6
VTI1AQ96AJ9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.32■■■□□ 2.6
VTI1AQ96AJ9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
VTI1AQ96AJ9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
VTI1AQ96AJ9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
VTI1AQ96AJ9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.3■■■□□ 2.6
VTI1AQ96AJ9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.27■■■□□ 2.6
VTI1AQ96AJ9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
VTI1AQ96AJ9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
VTI1AQ96AJ9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
VTI1AQ96AJ9 MIR3665-201ENST00000578708 105 ntBASIC31.24■■■□□ 2.59
VTI1AQ96AJ9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
VTI1AQ96AJ9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.2■■■□□ 2.59
VTI1AQ96AJ9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.2■■■□□ 2.59
VTI1AQ96AJ9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.19■■■□□ 2.58
VTI1AQ96AJ9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
VTI1AQ96AJ9 ABHD17AP4-201ENST00000411545 909 ntBASIC31.15■■■□□ 2.58
VTI1AQ96AJ9 MIR7108-201ENST00000614319 87 ntBASIC31.13■■■□□ 2.57
VTI1AQ96AJ9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
VTI1AQ96AJ9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
VTI1AQ96AJ9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.12■■■□□ 2.57
VTI1AQ96AJ9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
VTI1AQ96AJ9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
VTI1AQ96AJ9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.09■■■□□ 2.57
VTI1AQ96AJ9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
VTI1AQ96AJ9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
VTI1AQ96AJ9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
VTI1AQ96AJ9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VTI1AQ96AJ9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
VTI1AQ96AJ9 AC087741.3-201ENST00000624270 1347 ntBASIC31.06■■■□□ 2.56
VTI1AQ96AJ9 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.06■■■□□ 2.56
VTI1AQ96AJ9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.04■■■□□ 2.56
VTI1AQ96AJ9 DUX4L28-201ENST00000623687 678 ntBASIC31.04■■■□□ 2.56
VTI1AQ96AJ9 MIR762-201ENST00000390236 83 ntBASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
VTI1AQ96AJ9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.02■■■□□ 2.56
VTI1AQ96AJ9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
VTI1AQ96AJ9 AC005559.1-201ENST00000589661 871 ntBASIC30.99■■■□□ 2.55
VTI1AQ96AJ9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VTI1AQ96AJ9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
VTI1AQ96AJ9 AC044849.2-201ENST00000606596 710 ntBASIC30.98■■■□□ 2.55
VTI1AQ96AJ9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
VTI1AQ96AJ9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
VTI1AQ96AJ9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
VTI1AQ96AJ9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.97■■■□□ 2.55
VTI1AQ96AJ9 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
VTI1AQ96AJ9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.95■■■□□ 2.55
VTI1AQ96AJ9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.95■■■□□ 2.55
VTI1AQ96AJ9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.93■■■□□ 2.54
VTI1AQ96AJ9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VTI1AQ96AJ9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
VTI1AQ96AJ9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
VTI1AQ96AJ9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.89■■■□□ 2.54
VTI1AQ96AJ9 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
VTI1AQ96AJ9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
VTI1AQ96AJ9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
VTI1AQ96AJ9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.88■■■□□ 2.53
VTI1AQ96AJ9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
VTI1AQ96AJ9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
VTI1AQ96AJ9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms