Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CT55Q8WUE5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
CT55Q8WUE5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CT55Q8WUE5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.38■■□□□ 1.81
CT55Q8WUE5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CT55Q8WUE5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CT55Q8WUE5 AL133380.1-201ENST00000506013 324 ntBASIC26.37■■□□□ 1.81
CT55Q8WUE5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CT55Q8WUE5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CT55Q8WUE5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.36■■□□□ 1.81
CT55Q8WUE5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CT55Q8WUE5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.33■■□□□ 1.81
CT55Q8WUE5 AL391121.1-201ENST00000607967 1349 ntBASIC26.33■■□□□ 1.81
CT55Q8WUE5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CT55Q8WUE5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.32■■□□□ 1.8
CT55Q8WUE5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CT55Q8WUE5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CT55Q8WUE5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CT55Q8WUE5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CT55Q8WUE5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CT55Q8WUE5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.25■■□□□ 1.79
CT55Q8WUE5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CT55Q8WUE5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CT55Q8WUE5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CT55Q8WUE5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
CT55Q8WUE5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CT55Q8WUE5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.2■■□□□ 1.78
CT55Q8WUE5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.2■■□□□ 1.78
CT55Q8WUE5 AL162393.1-201ENST00000437852 946 ntBASIC26.18■■□□□ 1.78
CT55Q8WUE5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.17■■□□□ 1.78
CT55Q8WUE5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.17■■□□□ 1.78
CT55Q8WUE5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CT55Q8WUE5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.16■■□□□ 1.78
CT55Q8WUE5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CT55Q8WUE5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
CT55Q8WUE5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CT55Q8WUE5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CT55Q8WUE5 AP006261.1-201ENST00000584783 668 ntBASIC26.14■■□□□ 1.78
CT55Q8WUE5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.14■■□□□ 1.78
CT55Q8WUE5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.14■■□□□ 1.77
CT55Q8WUE5 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.11■■□□□ 1.77
CT55Q8WUE5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CT55Q8WUE5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.09■■□□□ 1.77
CT55Q8WUE5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CT55Q8WUE5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CT55Q8WUE5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CT55Q8WUE5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.07■■□□□ 1.76
CT55Q8WUE5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CT55Q8WUE5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.07■■□□□ 1.76
CT55Q8WUE5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CT55Q8WUE5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CT55Q8WUE5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CT55Q8WUE5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CT55Q8WUE5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CT55Q8WUE5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CT55Q8WUE5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
CT55Q8WUE5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.01■■□□□ 1.75
CT55Q8WUE5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CT55Q8WUE5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CT55Q8WUE5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CT55Q8WUE5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.96■■□□□ 1.75
CT55Q8WUE5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.96■■□□□ 1.75
CT55Q8WUE5 MIR3665-201ENST00000578708 105 ntBASIC25.96■■□□□ 1.75
CT55Q8WUE5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CT55Q8WUE5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CT55Q8WUE5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
CT55Q8WUE5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.93■■□□□ 1.74
CT55Q8WUE5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.92■■□□□ 1.74
CT55Q8WUE5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CT55Q8WUE5 MIR762-201ENST00000390236 83 ntBASIC25.9■■□□□ 1.74
CT55Q8WUE5 DUX4L28-201ENST00000623687 678 ntBASIC25.89■■□□□ 1.74
CT55Q8WUE5 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.89■■□□□ 1.74
CT55Q8WUE5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CT55Q8WUE5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CT55Q8WUE5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.87■■□□□ 1.73
CT55Q8WUE5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CT55Q8WUE5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.85■■□□□ 1.73
CT55Q8WUE5 AC087741.3-201ENST00000624270 1347 ntBASIC25.85■■□□□ 1.73
CT55Q8WUE5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CT55Q8WUE5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CT55Q8WUE5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
CT55Q8WUE5 AC005559.1-201ENST00000589661 871 ntBASIC25.83■■□□□ 1.73
CT55Q8WUE5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CT55Q8WUE5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.81■■□□□ 1.72
CT55Q8WUE5 WASH5P-204ENST00000632292 975 ntBASIC25.81■■□□□ 1.72
CT55Q8WUE5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.8■■□□□ 1.72
CT55Q8WUE5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CT55Q8WUE5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.79■■□□□ 1.72
CT55Q8WUE5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CT55Q8WUE5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CT55Q8WUE5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
CT55Q8WUE5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
CT55Q8WUE5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.75■■□□□ 1.71
CT55Q8WUE5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.75■■□□□ 1.71
CT55Q8WUE5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CT55Q8WUE5 AC044849.2-201ENST00000606596 710 ntBASIC25.74■■□□□ 1.71
CT55Q8WUE5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CT55Q8WUE5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CT55Q8WUE5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CT55Q8WUE5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms