Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 RPS2P35-201ENST00000443417 897 ntBASIC34.87■■■■□ 3.17
RTL9Q8NET4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC34.87■■■■□ 3.17
RTL9Q8NET4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC34.85■■■■□ 3.17
RTL9Q8NET4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
RTL9Q8NET4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
RTL9Q8NET4 AL133380.1-201ENST00000506013 324 ntBASIC34.84■■■■□ 3.17
RTL9Q8NET4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC34.83■■■■□ 3.17
RTL9Q8NET4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
RTL9Q8NET4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC34.83■■■■□ 3.17
RTL9Q8NET4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
RTL9Q8NET4 CAHM-201ENST00000604200 896 ntBASIC34.8■■■■□ 3.16
RTL9Q8NET4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
RTL9Q8NET4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
RTL9Q8NET4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
RTL9Q8NET4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC34.75■■■■□ 3.15
RTL9Q8NET4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC34.75■■■■□ 3.15
RTL9Q8NET4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.75■■■■□ 3.15
RTL9Q8NET4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
RTL9Q8NET4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
RTL9Q8NET4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
RTL9Q8NET4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
RTL9Q8NET4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
RTL9Q8NET4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC34.7■■■■□ 3.15
RTL9Q8NET4 AL391121.1-201ENST00000607967 1349 ntBASIC34.7■■■■□ 3.15
RTL9Q8NET4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC34.7■■■■□ 3.15
RTL9Q8NET4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC34.67■■■■□ 3.14
RTL9Q8NET4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
RTL9Q8NET4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.65■■■■□ 3.14
RTL9Q8NET4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
RTL9Q8NET4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC34.62■■■■□ 3.13
RTL9Q8NET4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
RTL9Q8NET4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
RTL9Q8NET4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
RTL9Q8NET4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.56■■■■□ 3.12
RTL9Q8NET4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.55■■■■□ 3.12
RTL9Q8NET4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
RTL9Q8NET4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
RTL9Q8NET4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.51■■■■□ 3.12
RTL9Q8NET4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.51■■■■□ 3.12
RTL9Q8NET4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC34.5■■■■□ 3.11
RTL9Q8NET4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
RTL9Q8NET4 AL162393.1-201ENST00000437852 946 ntBASIC34.48■■■■□ 3.11
RTL9Q8NET4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.47■■■■□ 3.11
RTL9Q8NET4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
RTL9Q8NET4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
RTL9Q8NET4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
RTL9Q8NET4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC34.41■■■■□ 3.1
RTL9Q8NET4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
RTL9Q8NET4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
RTL9Q8NET4 AP006261.1-201ENST00000584783 668 ntBASIC34.38■■■■□ 3.09
RTL9Q8NET4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
RTL9Q8NET4 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.36■■■■□ 3.09
RTL9Q8NET4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC34.33■■■■□ 3.09
RTL9Q8NET4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.31■■■■□ 3.08
RTL9Q8NET4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
RTL9Q8NET4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
RTL9Q8NET4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
RTL9Q8NET4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
RTL9Q8NET4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
RTL9Q8NET4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.26■■■■□ 3.08
RTL9Q8NET4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
RTL9Q8NET4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.25■■■■□ 3.07
RTL9Q8NET4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.25■■■■□ 3.07
RTL9Q8NET4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
RTL9Q8NET4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
RTL9Q8NET4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
RTL9Q8NET4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC34.22■■■■□ 3.07
RTL9Q8NET4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC34.22■■■■□ 3.07
RTL9Q8NET4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
RTL9Q8NET4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.2■■■■□ 3.07
RTL9Q8NET4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC34.18■■■■□ 3.06
RTL9Q8NET4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
RTL9Q8NET4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.18■■■■□ 3.06
RTL9Q8NET4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC34.18■■■■□ 3.06
RTL9Q8NET4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.17■■■■□ 3.06
RTL9Q8NET4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
RTL9Q8NET4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
RTL9Q8NET4 WASH5P-204ENST00000632292 975 ntBASIC34.13■■■■□ 3.05
RTL9Q8NET4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.12■■■■□ 3.05
RTL9Q8NET4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC34.11■■■■□ 3.05
RTL9Q8NET4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
RTL9Q8NET4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.1■■■■□ 3.05
RTL9Q8NET4 MIR3665-201ENST00000578708 105 ntBASIC34.1■■■■□ 3.05
RTL9Q8NET4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.1■■■■□ 3.05
RTL9Q8NET4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC34.09■■■■□ 3.05
RTL9Q8NET4 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.09■■■■□ 3.05
RTL9Q8NET4 MIR762-201ENST00000390236 83 ntBASIC34.08■■■■□ 3.05
RTL9Q8NET4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.08■■■■□ 3.05
RTL9Q8NET4 DUX4L28-201ENST00000623687 678 ntBASIC34.07■■■■□ 3.04
RTL9Q8NET4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC34.06■■■■□ 3.04
RTL9Q8NET4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
RTL9Q8NET4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
RTL9Q8NET4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.01■■■■□ 3.04
RTL9Q8NET4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
RTL9Q8NET4 AC087741.3-201ENST00000624270 1347 ntBASIC33.99■■■■□ 3.03
RTL9Q8NET4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
RTL9Q8NET4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
RTL9Q8NET4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.96■■■■□ 3.03
RTL9Q8NET4 AC005559.1-201ENST00000589661 871 ntBASIC33.96■■■■□ 3.03
RTL9Q8NET4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.96■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms