Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RNF169Q8NCN4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RNF169Q8NCN4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
RNF169Q8NCN4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RNF169Q8NCN4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RNF169Q8NCN4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
RNF169Q8NCN4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.49■■■□□ 2.47
RNF169Q8NCN4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RNF169Q8NCN4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.48■■■□□ 2.47
RNF169Q8NCN4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RNF169Q8NCN4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.47■■■□□ 2.47
RNF169Q8NCN4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
RNF169Q8NCN4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.46■■■□□ 2.47
RNF169Q8NCN4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.45■■■□□ 2.46
RNF169Q8NCN4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RNF169Q8NCN4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RNF169Q8NCN4 CAHM-201ENST00000604200 896 ntBASIC30.43■■■□□ 2.46
RNF169Q8NCN4 RPS2P35-201ENST00000443417 897 ntBASIC30.4■■■□□ 2.46
RNF169Q8NCN4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RNF169Q8NCN4 AL133380.1-201ENST00000506013 324 ntBASIC30.39■■■□□ 2.46
RNF169Q8NCN4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.38■■■□□ 2.45
RNF169Q8NCN4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RNF169Q8NCN4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.34■■■□□ 2.45
RNF169Q8NCN4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RNF169Q8NCN4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RNF169Q8NCN4 AL391121.1-201ENST00000607967 1349 ntBASIC30.31■■■□□ 2.44
RNF169Q8NCN4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RNF169Q8NCN4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RNF169Q8NCN4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
RNF169Q8NCN4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
RNF169Q8NCN4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RNF169Q8NCN4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.23■■■□□ 2.43
RNF169Q8NCN4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.22■■■□□ 2.43
RNF169Q8NCN4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.21■■■□□ 2.43
RNF169Q8NCN4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RNF169Q8NCN4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.17■■■□□ 2.42
RNF169Q8NCN4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
RNF169Q8NCN4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.15■■■□□ 2.42
RNF169Q8NCN4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.15■■■□□ 2.42
RNF169Q8NCN4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RNF169Q8NCN4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RNF169Q8NCN4 AL162393.1-201ENST00000437852 946 ntBASIC30.13■■■□□ 2.41
RNF169Q8NCN4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
RNF169Q8NCN4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
RNF169Q8NCN4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
RNF169Q8NCN4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.07■■■□□ 2.4
RNF169Q8NCN4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RNF169Q8NCN4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
RNF169Q8NCN4 AP006261.1-201ENST00000584783 668 ntBASIC30.07■■■□□ 2.4
RNF169Q8NCN4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.07■■■□□ 2.4
RNF169Q8NCN4 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.05■■■□□ 2.4
RNF169Q8NCN4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RNF169Q8NCN4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RNF169Q8NCN4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RNF169Q8NCN4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RNF169Q8NCN4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.03■■■□□ 2.4
RNF169Q8NCN4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RNF169Q8NCN4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.02■■■□□ 2.4
RNF169Q8NCN4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RNF169Q8NCN4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.98■■■□□ 2.39
RNF169Q8NCN4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RNF169Q8NCN4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RNF169Q8NCN4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RNF169Q8NCN4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
RNF169Q8NCN4 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
RNF169Q8NCN4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RNF169Q8NCN4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF169Q8NCN4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
RNF169Q8NCN4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.9■■■□□ 2.38
RNF169Q8NCN4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
RNF169Q8NCN4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.88■■■□□ 2.37
RNF169Q8NCN4 MIR3665-201ENST00000578708 105 ntBASIC29.88■■■□□ 2.37
RNF169Q8NCN4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RNF169Q8NCN4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
RNF169Q8NCN4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
RNF169Q8NCN4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RNF169Q8NCN4 MIR762-201ENST00000390236 83 ntBASIC29.86■■■□□ 2.37
RNF169Q8NCN4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.86■■■□□ 2.37
RNF169Q8NCN4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.86■■■□□ 2.37
RNF169Q8NCN4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.85■■■□□ 2.37
RNF169Q8NCN4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
RNF169Q8NCN4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RNF169Q8NCN4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RNF169Q8NCN4 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.83■■■□□ 2.37
RNF169Q8NCN4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF169Q8NCN4 DUX4L28-201ENST00000623687 678 ntBASIC29.82■■■□□ 2.36
RNF169Q8NCN4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RNF169Q8NCN4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
RNF169Q8NCN4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.8■■■□□ 2.36
RNF169Q8NCN4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
RNF169Q8NCN4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
RNF169Q8NCN4 AC005559.1-201ENST00000589661 871 ntBASIC29.78■■■□□ 2.36
RNF169Q8NCN4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.76■■■□□ 2.35
RNF169Q8NCN4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.76■■■□□ 2.35
RNF169Q8NCN4 WASH5P-204ENST00000632292 975 ntBASIC29.76■■■□□ 2.35
RNF169Q8NCN4 AC087741.3-201ENST00000624270 1347 ntBASIC29.75■■■□□ 2.35
RNF169Q8NCN4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF169Q8NCN4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.75■■■□□ 2.35
RNF169Q8NCN4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.74■■■□□ 2.35
RNF169Q8NCN4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms