Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC42.86■■■■■ 4.45
ABCA6Q8N139 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC42.82■■■■■ 4.45
ABCA6Q8N139 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC42.82■■■■■ 4.45
ABCA6Q8N139 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC42.8■■■■■ 4.44
ABCA6Q8N139 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC42.76■■■■■ 4.44
ABCA6Q8N139 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC42.76■■■■■ 4.44
ABCA6Q8N139 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC42.76■■■■■ 4.43
ABCA6Q8N139 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC42.75■■■■■ 4.43
ABCA6Q8N139 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC42.74■■■■■ 4.43
ABCA6Q8N139 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC42.73■■■■■ 4.43
ABCA6Q8N139 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC42.7■■■■■ 4.43
ABCA6Q8N139 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC42.7■■■■■ 4.43
ABCA6Q8N139 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC42.65■■■■■ 4.42
ABCA6Q8N139 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC42.64■■■■■ 4.42
ABCA6Q8N139 EBPL-202ENST00000378268 680 ntTSL 3 BASIC42.63■■■■■ 4.41
ABCA6Q8N139 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC42.62■■■■■ 4.41
ABCA6Q8N139 MIR7108-201ENST00000614319 87 ntBASIC42.62■■■■■ 4.41
ABCA6Q8N139 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC42.61■■■■■ 4.41
ABCA6Q8N139 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC42.61■■■■■ 4.41
ABCA6Q8N139 DUX4L28-201ENST00000623687 678 ntBASIC42.61■■■■■ 4.41
ABCA6Q8N139 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC42.57■■■■■ 4.41
ABCA6Q8N139 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC42.57■■■■■ 4.4
ABCA6Q8N139 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC42.54■■■■■ 4.4
ABCA6Q8N139 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC42.53■■■■■ 4.4
ABCA6Q8N139 AC087741.3-201ENST00000624270 1347 ntBASIC42.52■■■■■ 4.4
ABCA6Q8N139 MIR3665-201ENST00000578708 105 ntBASIC42.51■■■■■ 4.4
ABCA6Q8N139 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC42.5■■■■■ 4.39
ABCA6Q8N139 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC42.49■■■■■ 4.39
ABCA6Q8N139 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC42.47■■■■■ 4.39
ABCA6Q8N139 ABHD17AP4-201ENST00000411545 909 ntBASIC42.46■■■■■ 4.39
ABCA6Q8N139 MLEC-202ENST00000412616 841 ntTSL 3 BASIC42.46■■■■■ 4.39
ABCA6Q8N139 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC42.45■■■■■ 4.39
ABCA6Q8N139 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC42.42■■■■■ 4.38
ABCA6Q8N139 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC42.39■■■■■ 4.38
ABCA6Q8N139 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC42.37■■■■■ 4.37
ABCA6Q8N139 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC42.36■■■■■ 4.37
ABCA6Q8N139 AC044849.2-201ENST00000606596 710 ntBASIC42.35■■■■■ 4.37
ABCA6Q8N139 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC42.34■■■■■ 4.37
ABCA6Q8N139 PVT1-219ENST00000523427 938 ntTSL 3 BASIC42.34■■■■■ 4.37
ABCA6Q8N139 HLA-V-202ENST00000446817 847 ntBASIC42.33■■■■■ 4.37
ABCA6Q8N139 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC42.32■■■■■ 4.37
ABCA6Q8N139 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC42.31■■■■■ 4.36
ABCA6Q8N139 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC42.31■■■■■ 4.36
ABCA6Q8N139 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC42.29■■■■■ 4.36
ABCA6Q8N139 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC42.25■■■■■ 4.35
ABCA6Q8N139 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC42.23■■■■■ 4.35
ABCA6Q8N139 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC42.22■■■■■ 4.35
ABCA6Q8N139 MBP-237ENST00000579129 1052 ntTSL 5 BASIC42.21■■■■■ 4.35
ABCA6Q8N139 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC42.2■■■■■ 4.35
ABCA6Q8N139 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC42.2■■■■■ 4.35
ABCA6Q8N139 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC42.2■■■■■ 4.35
ABCA6Q8N139 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC42.2■■■■■ 4.35
ABCA6Q8N139 MIR762-201ENST00000390236 83 ntBASIC42.2■■■■■ 4.35
ABCA6Q8N139 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC42.19■■■■■ 4.34
ABCA6Q8N139 AC005559.1-201ENST00000589661 871 ntBASIC42.18■■■■■ 4.34
ABCA6Q8N139 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC42.16■■■■■ 4.34
ABCA6Q8N139 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC42.15■■■■■ 4.34
ABCA6Q8N139 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC42.14■■■■■ 4.34
ABCA6Q8N139 CHML-205ENST00000638160 705 ntTSL 3 BASIC42.13■■■■■ 4.34
ABCA6Q8N139 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC42.1■■■■■ 4.33
ABCA6Q8N139 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC42.04■■■■■ 4.32
ABCA6Q8N139 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC42.04■■■■■ 4.32
ABCA6Q8N139 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC42.04■■■■■ 4.32
ABCA6Q8N139 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC42.02■■■■■ 4.32
ABCA6Q8N139 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC42.01■■■■■ 4.32
ABCA6Q8N139 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC42.01■■■■■ 4.32
ABCA6Q8N139 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC41.99■■■■■ 4.31
ABCA6Q8N139 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC41.99■■■■■ 4.31
ABCA6Q8N139 DENR-202ENST00000455982 1052 ntTSL 5 BASIC41.98■■■■■ 4.31
ABCA6Q8N139 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC41.98■■■■■ 4.31
ABCA6Q8N139 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC41.96■■■■■ 4.31
ABCA6Q8N139 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC41.95■■■■■ 4.31
ABCA6Q8N139 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC41.95■■■■■ 4.31
ABCA6Q8N139 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC41.95■■■■■ 4.31
ABCA6Q8N139 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC41.94■■■■■ 4.3
ABCA6Q8N139 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC41.93■■■■■ 4.3
ABCA6Q8N139 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC41.93■■■■■ 4.3
ABCA6Q8N139 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC41.91■■■■■ 4.3
ABCA6Q8N139 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
ABCA6Q8N139 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC41.86■■■■■ 4.29
ABCA6Q8N139 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
ABCA6Q8N139 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC41.81■■■■■ 4.28
ABCA6Q8N139 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC41.81■■■■■ 4.28
ABCA6Q8N139 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC41.8■■■■■ 4.28
ABCA6Q8N139 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC41.8■■■■■ 4.28
ABCA6Q8N139 ZNRF2P2-203ENST00000454624 420 ntBASIC41.79■■■■■ 4.28
ABCA6Q8N139 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC41.77■■■■■ 4.28
ABCA6Q8N139 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC41.77■■■■■ 4.28
ABCA6Q8N139 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC41.77■■■■■ 4.28
ABCA6Q8N139 BOD1-206ENST00000480951 814 ntTSL 2 BASIC41.77■■■■■ 4.28
ABCA6Q8N139 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC41.77■■■■■ 4.28
ABCA6Q8N139 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC41.76■■■■■ 4.28
ABCA6Q8N139 RPS2-202ENST00000526522 924 ntTSL 2 BASIC41.74■■■■■ 4.27
ABCA6Q8N139 HGH1-207ENST00000628266 258 ntTSL 5 BASIC41.74■■■■■ 4.27
ABCA6Q8N139 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC41.74■■■■■ 4.27
ABCA6Q8N139 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC41.72■■■■■ 4.27
ABCA6Q8N139 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC41.72■■■■■ 4.27
ABCA6Q8N139 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC41.72■■■■■ 4.27
ABCA6Q8N139 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC41.67■■■■■ 4.26
ABCA6Q8N139 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC41.66■■■■■ 4.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms