Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LINC00346Q8IVM7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
LINC00346Q8IVM7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
LINC00346Q8IVM7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
LINC00346Q8IVM7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LINC00346Q8IVM7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.52■■□□□ 1.52
LINC00346Q8IVM7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.52■■□□□ 1.52
LINC00346Q8IVM7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.52■■□□□ 1.52
LINC00346Q8IVM7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINC00346Q8IVM7 DYNLL1-208ENST00000550178 581 ntBASIC24.51■■□□□ 1.51
LINC00346Q8IVM7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
LINC00346Q8IVM7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
LINC00346Q8IVM7 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.5■■□□□ 1.51
LINC00346Q8IVM7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
LINC00346Q8IVM7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.49■■□□□ 1.51
LINC00346Q8IVM7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LINC00346Q8IVM7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.47■■□□□ 1.51
LINC00346Q8IVM7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
LINC00346Q8IVM7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC24.46■■□□□ 1.51
LINC00346Q8IVM7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LINC00346Q8IVM7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
LINC00346Q8IVM7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LINC00346Q8IVM7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINC00346Q8IVM7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.44■■□□□ 1.5
LINC00346Q8IVM7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LINC00346Q8IVM7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINC00346Q8IVM7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LINC00346Q8IVM7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.39■■□□□ 1.5
LINC00346Q8IVM7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.39■■□□□ 1.49
LINC00346Q8IVM7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.39■■□□□ 1.49
LINC00346Q8IVM7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
LINC00346Q8IVM7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LINC00346Q8IVM7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LINC00346Q8IVM7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LINC00346Q8IVM7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LINC00346Q8IVM7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LINC00346Q8IVM7 AP002365.1-201ENST00000603448 772 ntBASIC24.36■■□□□ 1.49
LINC00346Q8IVM7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LINC00346Q8IVM7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LINC00346Q8IVM7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LINC00346Q8IVM7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LINC00346Q8IVM7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LINC00346Q8IVM7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
LINC00346Q8IVM7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.33■■□□□ 1.49
LINC00346Q8IVM7 AL031258.1-201ENST00000623562 325 ntBASIC24.33■■□□□ 1.49
LINC00346Q8IVM7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LINC00346Q8IVM7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.33■■□□□ 1.49
LINC00346Q8IVM7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00346Q8IVM7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
LINC00346Q8IVM7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.31■■□□□ 1.48
LINC00346Q8IVM7 AC120057.4-201ENST00000624722 1615 ntBASIC24.31■■□□□ 1.48
LINC00346Q8IVM7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.29■■□□□ 1.48
LINC00346Q8IVM7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.28■■□□□ 1.48
LINC00346Q8IVM7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
LINC00346Q8IVM7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LINC00346Q8IVM7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LINC00346Q8IVM7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.25■■□□□ 1.47
LINC00346Q8IVM7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
LINC00346Q8IVM7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
LINC00346Q8IVM7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.23■■□□□ 1.47
LINC00346Q8IVM7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
LINC00346Q8IVM7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.22■■□□□ 1.47
LINC00346Q8IVM7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
LINC00346Q8IVM7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
LINC00346Q8IVM7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.21■■□□□ 1.47
LINC00346Q8IVM7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
LINC00346Q8IVM7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
LINC00346Q8IVM7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
LINC00346Q8IVM7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.16■■□□□ 1.46
LINC00346Q8IVM7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LINC00346Q8IVM7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
LINC00346Q8IVM7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.14■■□□□ 1.46
LINC00346Q8IVM7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
LINC00346Q8IVM7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LINC00346Q8IVM7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
LINC00346Q8IVM7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
LINC00346Q8IVM7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LINC00346Q8IVM7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LINC00346Q8IVM7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LINC00346Q8IVM7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LINC00346Q8IVM7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.11■■□□□ 1.45
LINC00346Q8IVM7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LINC00346Q8IVM7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.11■■□□□ 1.45
LINC00346Q8IVM7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.1■■□□□ 1.45
LINC00346Q8IVM7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
LINC00346Q8IVM7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LINC00346Q8IVM7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LINC00346Q8IVM7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
LINC00346Q8IVM7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LINC00346Q8IVM7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LINC00346Q8IVM7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.03■■□□□ 1.44
LINC00346Q8IVM7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LINC00346Q8IVM7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LINC00346Q8IVM7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LINC00346Q8IVM7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.01■■□□□ 1.43
LINC00346Q8IVM7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.01■■□□□ 1.43
LINC00346Q8IVM7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
LINC00346Q8IVM7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24■■□□□ 1.43
LINC00346Q8IVM7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
LINC00346Q8IVM7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms