Protein–RNA interactions for Protein: Q86UA6

RPAIN, RPA-interacting protein, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAINQ86UA6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
RPAINQ86UA6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RPAINQ86UA6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RPAINQ86UA6 AL133380.1-201ENST00000506013 324 ntBASIC30.97■■■□□ 2.55
RPAINQ86UA6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
RPAINQ86UA6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RPAINQ86UA6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
RPAINQ86UA6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
RPAINQ86UA6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
RPAINQ86UA6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.95■■■□□ 2.55
RPAINQ86UA6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
RPAINQ86UA6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RPAINQ86UA6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
RPAINQ86UA6 AL391121.1-201ENST00000607967 1349 ntBASIC30.92■■■□□ 2.54
RPAINQ86UA6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RPAINQ86UA6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.91■■■□□ 2.54
RPAINQ86UA6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.91■■■□□ 2.54
RPAINQ86UA6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
RPAINQ86UA6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.89■■■□□ 2.54
RPAINQ86UA6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.89■■■□□ 2.54
RPAINQ86UA6 RPS2P35-201ENST00000443417 897 ntBASIC30.88■■■□□ 2.53
RPAINQ86UA6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RPAINQ86UA6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RPAINQ86UA6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RPAINQ86UA6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RPAINQ86UA6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.82■■■□□ 2.52
RPAINQ86UA6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.78■■■□□ 2.52
RPAINQ86UA6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
RPAINQ86UA6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RPAINQ86UA6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.76■■■□□ 2.51
RPAINQ86UA6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RPAINQ86UA6 AP006261.1-201ENST00000584783 668 ntBASIC30.75■■■□□ 2.51
RPAINQ86UA6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RPAINQ86UA6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.7■■■□□ 2.51
RPAINQ86UA6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.69■■■□□ 2.5
RPAINQ86UA6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.69■■■□□ 2.5
RPAINQ86UA6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
RPAINQ86UA6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RPAINQ86UA6 AL162393.1-201ENST00000437852 946 ntBASIC30.68■■■□□ 2.5
RPAINQ86UA6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.66■■■□□ 2.5
RPAINQ86UA6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
RPAINQ86UA6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RPAINQ86UA6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RPAINQ86UA6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.65■■■□□ 2.5
RPAINQ86UA6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RPAINQ86UA6 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.64■■■□□ 2.5
RPAINQ86UA6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RPAINQ86UA6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RPAINQ86UA6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
RPAINQ86UA6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.6■■■□□ 2.49
RPAINQ86UA6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RPAINQ86UA6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RPAINQ86UA6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RPAINQ86UA6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.58■■■□□ 2.49
RPAINQ86UA6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.58■■■□□ 2.49
RPAINQ86UA6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
RPAINQ86UA6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RPAINQ86UA6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RPAINQ86UA6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RPAINQ86UA6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
RPAINQ86UA6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RPAINQ86UA6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.52■■■□□ 2.48
RPAINQ86UA6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.51■■■□□ 2.47
RPAINQ86UA6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.51■■■□□ 2.47
RPAINQ86UA6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
RPAINQ86UA6 MIR3665-201ENST00000578708 105 ntBASIC30.48■■■□□ 2.47
RPAINQ86UA6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RPAINQ86UA6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.47■■■□□ 2.47
RPAINQ86UA6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RPAINQ86UA6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.45■■■□□ 2.47
RPAINQ86UA6 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.43■■■□□ 2.46
RPAINQ86UA6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RPAINQ86UA6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RPAINQ86UA6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RPAINQ86UA6 MIR762-201ENST00000390236 83 ntBASIC30.38■■■□□ 2.45
RPAINQ86UA6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RPAINQ86UA6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
RPAINQ86UA6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.36■■■□□ 2.45
RPAINQ86UA6 DUX4L28-201ENST00000623687 678 ntBASIC30.35■■■□□ 2.45
RPAINQ86UA6 AC087741.3-201ENST00000624270 1347 ntBASIC30.34■■■□□ 2.45
RPAINQ86UA6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.34■■■□□ 2.45
RPAINQ86UA6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RPAINQ86UA6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RPAINQ86UA6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.32■■■□□ 2.44
RPAINQ86UA6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RPAINQ86UA6 WASH5P-204ENST00000632292 975 ntBASIC30.31■■■□□ 2.44
RPAINQ86UA6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RPAINQ86UA6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RPAINQ86UA6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
RPAINQ86UA6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
RPAINQ86UA6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.28■■■□□ 2.44
RPAINQ86UA6 AC005559.1-201ENST00000589661 871 ntBASIC30.27■■■□□ 2.44
RPAINQ86UA6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RPAINQ86UA6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RPAINQ86UA6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.25■■■□□ 2.43
RPAINQ86UA6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RPAINQ86UA6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RPAINQ86UA6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RPAINQ86UA6 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
RPAINQ86UA6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms