Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPL55Q7Z7F7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MRPL55Q7Z7F7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.66■□□□□ 0.42
MRPL55Q7Z7F7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRPL55Q7Z7F7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRPL55Q7Z7F7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRPL55Q7Z7F7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MRPL55Q7Z7F7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MRPL55Q7Z7F7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRPL55Q7Z7F7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC17.64■□□□□ 0.41
MRPL55Q7Z7F7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC17.63■□□□□ 0.41
MRPL55Q7Z7F7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC17.63■□□□□ 0.41
MRPL55Q7Z7F7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MRPL55Q7Z7F7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
MRPL55Q7Z7F7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MRPL55Q7Z7F7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPL55Q7Z7F7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MRPL55Q7Z7F7 MVK-208ENST00000539696 608 ntTSL 5 BASIC17.61■□□□□ 0.41
MRPL55Q7Z7F7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPL55Q7Z7F7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPL55Q7Z7F7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPL55Q7Z7F7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MRPL55Q7Z7F7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPL55Q7Z7F7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPL55Q7Z7F7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MRPL55Q7Z7F7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MRPL55Q7Z7F7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MRPL55Q7Z7F7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MRPL55Q7Z7F7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MRPL55Q7Z7F7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MRPL55Q7Z7F7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MRPL55Q7Z7F7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL55Q7Z7F7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL55Q7Z7F7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL55Q7Z7F7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL55Q7Z7F7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
MRPL55Q7Z7F7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.56■□□□□ 0.4
MRPL55Q7Z7F7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPL55Q7Z7F7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MRPL55Q7Z7F7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC17.55■□□□□ 0.4
MRPL55Q7Z7F7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
MRPL55Q7Z7F7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC17.54■□□□□ 0.4
MRPL55Q7Z7F7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC17.54■□□□□ 0.4
MRPL55Q7Z7F7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.54■□□□□ 0.4
MRPL55Q7Z7F7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MRPL55Q7Z7F7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL55Q7Z7F7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.53■□□□□ 0.4
MRPL55Q7Z7F7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MRPL55Q7Z7F7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC17.52■□□□□ 0.4
MRPL55Q7Z7F7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC17.51■□□□□ 0.39
MRPL55Q7Z7F7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL55Q7Z7F7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL55Q7Z7F7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MRPL55Q7Z7F7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MRPL55Q7Z7F7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MRPL55Q7Z7F7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC17.46■□□□□ 0.39
MRPL55Q7Z7F7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MRPL55Q7Z7F7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL55Q7Z7F7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL55Q7Z7F7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL55Q7Z7F7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL55Q7Z7F7 DYNLL1-208ENST00000550178 581 ntBASIC17.45■□□□□ 0.38
MRPL55Q7Z7F7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPL55Q7Z7F7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC17.44■□□□□ 0.38
MRPL55Q7Z7F7 AC120057.4-201ENST00000624722 1615 ntBASIC17.44■□□□□ 0.38
MRPL55Q7Z7F7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPL55Q7Z7F7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPL55Q7Z7F7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL55Q7Z7F7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPL55Q7Z7F7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.42■□□□□ 0.38
MRPL55Q7Z7F7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.41■□□□□ 0.38
MRPL55Q7Z7F7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL55Q7Z7F7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL55Q7Z7F7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL55Q7Z7F7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MRPL55Q7Z7F7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL55Q7Z7F7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MRPL55Q7Z7F7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.4■□□□□ 0.38
MRPL55Q7Z7F7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC17.4■□□□□ 0.38
MRPL55Q7Z7F7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MRPL55Q7Z7F7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.39■□□□□ 0.37
MRPL55Q7Z7F7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
MRPL55Q7Z7F7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL55Q7Z7F7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MRPL55Q7Z7F7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MRPL55Q7Z7F7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL55Q7Z7F7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL55Q7Z7F7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRPL55Q7Z7F7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.36■□□□□ 0.37
MRPL55Q7Z7F7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL55Q7Z7F7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.35■□□□□ 0.37
MRPL55Q7Z7F7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRPL55Q7Z7F7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.34■□□□□ 0.37
MRPL55Q7Z7F7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL55Q7Z7F7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRPL55Q7Z7F7 AP002365.1-201ENST00000603448 772 ntBASIC17.34■□□□□ 0.37
MRPL55Q7Z7F7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC17.33■□□□□ 0.37
MRPL55Q7Z7F7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.33■□□□□ 0.36
MRPL55Q7Z7F7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPL55Q7Z7F7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms