Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.55■■■□□ 2.32
DENND4AQ7Z401 AP006261.1-201ENST00000584783 668 ntBASIC29.54■■■□□ 2.32
DENND4AQ7Z401 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
DENND4AQ7Z401 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
DENND4AQ7Z401 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
DENND4AQ7Z401 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
DENND4AQ7Z401 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
DENND4AQ7Z401 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.46■■■□□ 2.31
DENND4AQ7Z401 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
DENND4AQ7Z401 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
DENND4AQ7Z401 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.42■■■□□ 2.3
DENND4AQ7Z401 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
DENND4AQ7Z401 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.4■■■□□ 2.3
DENND4AQ7Z401 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.37■■■□□ 2.29
DENND4AQ7Z401 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.33■■■□□ 2.29
DENND4AQ7Z401 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.31■■■□□ 2.28
DENND4AQ7Z401 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
DENND4AQ7Z401 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
DENND4AQ7Z401 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
DENND4AQ7Z401 DUX4L28-201ENST00000623687 678 ntBASIC29.31■■■□□ 2.28
DENND4AQ7Z401 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.31■■■□□ 2.28
DENND4AQ7Z401 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
DENND4AQ7Z401 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
DENND4AQ7Z401 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.29■■■□□ 2.28
DENND4AQ7Z401 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
DENND4AQ7Z401 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.27■■■□□ 2.28
DENND4AQ7Z401 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
DENND4AQ7Z401 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
DENND4AQ7Z401 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
DENND4AQ7Z401 MIR3665-201ENST00000578708 105 ntBASIC29.23■■■□□ 2.27
DENND4AQ7Z401 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.23■■■□□ 2.27
DENND4AQ7Z401 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.23■■■□□ 2.27
DENND4AQ7Z401 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.21■■■□□ 2.27
DENND4AQ7Z401 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.2■■■□□ 2.26
DENND4AQ7Z401 AC044849.2-201ENST00000606596 710 ntBASIC29.2■■■□□ 2.26
DENND4AQ7Z401 AC087741.3-201ENST00000624270 1347 ntBASIC29.2■■■□□ 2.26
DENND4AQ7Z401 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
DENND4AQ7Z401 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
DENND4AQ7Z401 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
DENND4AQ7Z401 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
DENND4AQ7Z401 MIR7108-201ENST00000614319 87 ntBASIC29.17■■■□□ 2.26
DENND4AQ7Z401 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
DENND4AQ7Z401 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.15■■■□□ 2.26
DENND4AQ7Z401 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
DENND4AQ7Z401 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
DENND4AQ7Z401 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
DENND4AQ7Z401 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.13■■■□□ 2.25
DENND4AQ7Z401 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
DENND4AQ7Z401 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.1■■■□□ 2.25
DENND4AQ7Z401 AC005559.1-201ENST00000589661 871 ntBASIC29.08■■■□□ 2.25
DENND4AQ7Z401 ABHD17AP4-201ENST00000411545 909 ntBASIC29.06■■■□□ 2.24
DENND4AQ7Z401 HLA-V-202ENST00000446817 847 ntBASIC29.06■■■□□ 2.24
DENND4AQ7Z401 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
DENND4AQ7Z401 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.05■■■□□ 2.24
DENND4AQ7Z401 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
DENND4AQ7Z401 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.04■■■□□ 2.24
DENND4AQ7Z401 MIR762-201ENST00000390236 83 ntBASIC29.02■■■□□ 2.24
DENND4AQ7Z401 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
DENND4AQ7Z401 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29■■■□□ 2.23
DENND4AQ7Z401 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
DENND4AQ7Z401 CHML-205ENST00000638160 705 ntTSL 3 BASIC29■■■□□ 2.23
DENND4AQ7Z401 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.98■■■□□ 2.23
DENND4AQ7Z401 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
DENND4AQ7Z401 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
DENND4AQ7Z401 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.95■■■□□ 2.23
DENND4AQ7Z401 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.95■■■□□ 2.23
DENND4AQ7Z401 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.94■■■□□ 2.22
DENND4AQ7Z401 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
DENND4AQ7Z401 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.93■■■□□ 2.22
DENND4AQ7Z401 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.93■■■□□ 2.22
DENND4AQ7Z401 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.92■■■□□ 2.22
DENND4AQ7Z401 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.92■■■□□ 2.22
DENND4AQ7Z401 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
DENND4AQ7Z401 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
DENND4AQ7Z401 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DENND4AQ7Z401 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
DENND4AQ7Z401 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
DENND4AQ7Z401 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.21
DENND4AQ7Z401 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
DENND4AQ7Z401 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.88■■■□□ 2.21
DENND4AQ7Z401 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.87■■■□□ 2.21
DENND4AQ7Z401 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
DENND4AQ7Z401 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
DENND4AQ7Z401 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.86■■■□□ 2.21
DENND4AQ7Z401 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
DENND4AQ7Z401 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.85■■■□□ 2.21
DENND4AQ7Z401 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.85■■■□□ 2.21
DENND4AQ7Z401 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
DENND4AQ7Z401 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.84■■■□□ 2.21
DENND4AQ7Z401 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
DENND4AQ7Z401 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
DENND4AQ7Z401 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
DENND4AQ7Z401 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.81■■■□□ 2.2
DENND4AQ7Z401 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
DENND4AQ7Z401 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
DENND4AQ7Z401 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.78■■■□□ 2.2
DENND4AQ7Z401 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.78■■■□□ 2.2
DENND4AQ7Z401 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
DENND4AQ7Z401 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
DENND4AQ7Z401 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms