Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 ABHD17AP4-201ENST00000411545 909 ntBASIC27.16■■□□□ 1.94
KNTC1P50748 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.15■■□□□ 1.94
KNTC1P50748 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.15■■□□□ 1.94
KNTC1P50748 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
KNTC1P50748 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.14■■□□□ 1.94
KNTC1P50748 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
KNTC1P50748 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
KNTC1P50748 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
KNTC1P50748 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
KNTC1P50748 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
KNTC1P50748 MIR3665-201ENST00000578708 105 ntBASIC27.06■■□□□ 1.92
KNTC1P50748 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.05■■□□□ 1.92
KNTC1P50748 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
KNTC1P50748 MIR7108-201ENST00000614319 87 ntBASIC27.04■■□□□ 1.92
KNTC1P50748 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
KNTC1P50748 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
KNTC1P50748 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.02■■□□□ 1.92
KNTC1P50748 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27■■□□□ 1.91
KNTC1P50748 HLA-V-202ENST00000446817 847 ntBASIC27■■□□□ 1.91
KNTC1P50748 AL133380.1-201ENST00000506013 324 ntBASIC27■■□□□ 1.91
KNTC1P50748 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KNTC1P50748 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.99■■□□□ 1.91
KNTC1P50748 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
KNTC1P50748 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.98■■□□□ 1.91
KNTC1P50748 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.97■■□□□ 1.91
KNTC1P50748 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.93■■□□□ 1.9
KNTC1P50748 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.92■■□□□ 1.9
KNTC1P50748 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KNTC1P50748 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
KNTC1P50748 AC044849.2-201ENST00000606596 710 ntBASIC26.91■■□□□ 1.9
KNTC1P50748 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KNTC1P50748 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.89■■□□□ 1.9
KNTC1P50748 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KNTC1P50748 AC087741.3-201ENST00000624270 1347 ntBASIC26.86■■□□□ 1.89
KNTC1P50748 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
KNTC1P50748 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.84■■□□□ 1.89
KNTC1P50748 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KNTC1P50748 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
KNTC1P50748 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.82■■□□□ 1.88
KNTC1P50748 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.8■■□□□ 1.88
KNTC1P50748 DUX4L28-201ENST00000623687 678 ntBASIC26.79■■□□□ 1.88
KNTC1P50748 MIR762-201ENST00000390236 83 ntBASIC26.78■■□□□ 1.88
KNTC1P50748 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
KNTC1P50748 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
KNTC1P50748 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
KNTC1P50748 AC005559.1-201ENST00000589661 871 ntBASIC26.75■■□□□ 1.87
KNTC1P50748 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
KNTC1P50748 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
KNTC1P50748 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.69■■□□□ 1.86
KNTC1P50748 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
KNTC1P50748 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.67■■□□□ 1.86
KNTC1P50748 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
KNTC1P50748 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
KNTC1P50748 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.66■■□□□ 1.86
KNTC1P50748 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.66■■□□□ 1.86
KNTC1P50748 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.65■■□□□ 1.86
KNTC1P50748 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.65■■□□□ 1.86
KNTC1P50748 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.64■■□□□ 1.86
KNTC1P50748 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
KNTC1P50748 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.63■■□□□ 1.85
KNTC1P50748 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.63■■□□□ 1.85
KNTC1P50748 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.63■■□□□ 1.85
KNTC1P50748 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KNTC1P50748 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.62■■□□□ 1.85
KNTC1P50748 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.62■■□□□ 1.85
KNTC1P50748 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
KNTC1P50748 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
KNTC1P50748 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
KNTC1P50748 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.61■■□□□ 1.85
KNTC1P50748 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KNTC1P50748 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
KNTC1P50748 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KNTC1P50748 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.57■■□□□ 1.84
KNTC1P50748 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
KNTC1P50748 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.55■■□□□ 1.84
KNTC1P50748 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KNTC1P50748 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.55■■□□□ 1.84
KNTC1P50748 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
KNTC1P50748 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.54■■□□□ 1.84
KNTC1P50748 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
KNTC1P50748 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.53■■□□□ 1.84
KNTC1P50748 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KNTC1P50748 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.53■■□□□ 1.84
KNTC1P50748 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.53■■□□□ 1.84
KNTC1P50748 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.52■■□□□ 1.84
KNTC1P50748 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KNTC1P50748 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.51■■□□□ 1.84
KNTC1P50748 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
KNTC1P50748 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
KNTC1P50748 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
KNTC1P50748 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KNTC1P50748 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.44■■□□□ 1.82
KNTC1P50748 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
KNTC1P50748 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.44■■□□□ 1.82
KNTC1P50748 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
KNTC1P50748 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.42■■□□□ 1.82
KNTC1P50748 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
KNTC1P50748 MIR4449-201ENST00000578365 66 ntBASIC26.41■■□□□ 1.82
KNTC1P50748 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KNTC1P50748 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms