Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.46■■■□□ 2.63
RANBP2P49792 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
RANBP2P49792 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RANBP2P49792 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.42■■■□□ 2.62
RANBP2P49792 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.41■■■□□ 2.62
RANBP2P49792 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.41■■■□□ 2.62
RANBP2P49792 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RANBP2P49792 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.4■■■□□ 2.62
RANBP2P49792 MIR4449-201ENST00000578365 66 ntBASIC31.37■■■□□ 2.61
RANBP2P49792 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.32■■■□□ 2.6
RANBP2P49792 DUX4L28-201ENST00000623687 678 ntBASIC31.31■■■□□ 2.6
RANBP2P49792 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.3■■■□□ 2.6
RANBP2P49792 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.29■■■□□ 2.6
RANBP2P49792 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RANBP2P49792 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RANBP2P49792 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.27■■■□□ 2.6
RANBP2P49792 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.26■■■□□ 2.59
RANBP2P49792 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RANBP2P49792 AC044849.2-201ENST00000606596 710 ntBASIC31.25■■■□□ 2.59
RANBP2P49792 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.24■■■□□ 2.59
RANBP2P49792 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
RANBP2P49792 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
RANBP2P49792 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.2■■■□□ 2.59
RANBP2P49792 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.2■■■□□ 2.59
RANBP2P49792 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
RANBP2P49792 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
RANBP2P49792 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
RANBP2P49792 AC145285.7-201ENST00000614819 1539 ntBASIC31.18■■■□□ 2.58
RANBP2P49792 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.17■■■□□ 2.58
RANBP2P49792 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.17■■■□□ 2.58
RANBP2P49792 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RANBP2P49792 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.14■■■□□ 2.58
RANBP2P49792 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RANBP2P49792 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.13■■■□□ 2.57
RANBP2P49792 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.13■■■□□ 2.57
RANBP2P49792 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RANBP2P49792 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
RANBP2P49792 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RANBP2P49792 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
RANBP2P49792 AL133380.1-201ENST00000506013 324 ntBASIC31.09■■■□□ 2.57
RANBP2P49792 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.09■■■□□ 2.57
RANBP2P49792 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.08■■■□□ 2.57
RANBP2P49792 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
RANBP2P49792 HSD17B1P1-201ENST00000590052 955 ntBASIC31.06■■■□□ 2.56
RANBP2P49792 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RANBP2P49792 MIR762-201ENST00000390236 83 ntBASIC31.04■■■□□ 2.56
RANBP2P49792 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.02■■■□□ 2.56
RANBP2P49792 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
RANBP2P49792 AC005559.1-201ENST00000589661 871 ntBASIC30.99■■■□□ 2.55
RANBP2P49792 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
RANBP2P49792 ZNRF2P2-203ENST00000454624 420 ntBASIC30.97■■■□□ 2.55
RANBP2P49792 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RANBP2P49792 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.96■■■□□ 2.55
RANBP2P49792 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RANBP2P49792 MIR639-201ENST00000384974 98 ntBASIC30.94■■■□□ 2.54
RANBP2P49792 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
RANBP2P49792 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RANBP2P49792 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.9■■■□□ 2.54
RANBP2P49792 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
RANBP2P49792 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RANBP2P49792 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.87■■■□□ 2.53
RANBP2P49792 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
RANBP2P49792 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RANBP2P49792 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
RANBP2P49792 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.82■■■□□ 2.52
RANBP2P49792 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RANBP2P49792 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.81■■■□□ 2.52
RANBP2P49792 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
RANBP2P49792 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RANBP2P49792 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.8■■■□□ 2.52
RANBP2P49792 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RANBP2P49792 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RANBP2P49792 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.78■■■□□ 2.52
RANBP2P49792 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RANBP2P49792 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RANBP2P49792 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
RANBP2P49792 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RANBP2P49792 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.77■■■□□ 2.52
RANBP2P49792 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.76■■■□□ 2.51
RANBP2P49792 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.75■■■□□ 2.51
RANBP2P49792 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RANBP2P49792 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.73■■■□□ 2.51
RANBP2P49792 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RANBP2P49792 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.71■■■□□ 2.51
RANBP2P49792 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.65■■■□□ 2.5
RANBP2P49792 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RANBP2P49792 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
RANBP2P49792 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.63■■■□□ 2.49
RANBP2P49792 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RANBP2P49792 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.63■■■□□ 2.49
RANBP2P49792 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
RANBP2P49792 MIR3648-2-201ENST00000581792 180 ntBASIC30.62■■■□□ 2.49
RANBP2P49792 MIR3648-1-201ENST00000615959 180 ntBASIC30.62■■■□□ 2.49
RANBP2P49792 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.62■■■□□ 2.49
RANBP2P49792 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.61■■■□□ 2.49
RANBP2P49792 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RANBP2P49792 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.6■■■□□ 2.49
RANBP2P49792 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
RANBP2P49792 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.59■■■□□ 2.49
RANBP2P49792 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms