Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.46■■■□□ 2.63
RANBP2P49792 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
RANBP2P49792 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RANBP2P49792 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.42■■■□□ 2.62
RANBP2P49792 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.41■■■□□ 2.62
RANBP2P49792 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.41■■■□□ 2.62
RANBP2P49792 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RANBP2P49792 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.4■■■□□ 2.62
RANBP2P49792 MIR4449-201ENST00000578365 66 ntBASIC31.37■■■□□ 2.61
RANBP2P49792 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.32■■■□□ 2.6
RANBP2P49792 DUX4L28-201ENST00000623687 678 ntBASIC31.31■■■□□ 2.6
RANBP2P49792 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.3■■■□□ 2.6
RANBP2P49792 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.29■■■□□ 2.6
RANBP2P49792 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RANBP2P49792 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RANBP2P49792 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.27■■■□□ 2.6
RANBP2P49792 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.26■■■□□ 2.59
RANBP2P49792 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
RANBP2P49792 AC044849.2-201ENST00000606596 710 ntBASIC31.25■■■□□ 2.59
RANBP2P49792 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.24■■■□□ 2.59
RANBP2P49792 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
RANBP2P49792 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
RANBP2P49792 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.2■■■□□ 2.59
RANBP2P49792 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.2■■■□□ 2.59
RANBP2P49792 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
RANBP2P49792 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
RANBP2P49792 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
RANBP2P49792 AC145285.7-201ENST00000614819 1539 ntBASIC31.18■■■□□ 2.58
RANBP2P49792 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.17■■■□□ 2.58
RANBP2P49792 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.17■■■□□ 2.58
RANBP2P49792 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RANBP2P49792 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.14■■■□□ 2.58
RANBP2P49792 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RANBP2P49792 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.13■■■□□ 2.57
RANBP2P49792 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.13■■■□□ 2.57
RANBP2P49792 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RANBP2P49792 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
RANBP2P49792 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RANBP2P49792 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
RANBP2P49792 AL133380.1-201ENST00000506013 324 ntBASIC31.09■■■□□ 2.57
RANBP2P49792 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.09■■■□□ 2.57
RANBP2P49792 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.08■■■□□ 2.57
RANBP2P49792 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
RANBP2P49792 HSD17B1P1-201ENST00000590052 955 ntBASIC31.06■■■□□ 2.56
RANBP2P49792 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RANBP2P49792 MIR762-201ENST00000390236 83 ntBASIC31.04■■■□□ 2.56
RANBP2P49792 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.02■■■□□ 2.56
RANBP2P49792 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
RANBP2P49792 AC005559.1-201ENST00000589661 871 ntBASIC30.99■■■□□ 2.55
RANBP2P49792 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
RANBP2P49792 ZNRF2P2-203ENST00000454624 420 ntBASIC30.97■■■□□ 2.55
RANBP2P49792 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
RANBP2P49792 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.96■■■□□ 2.55
RANBP2P49792 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
RANBP2P49792 MIR639-201ENST00000384974 98 ntBASIC30.94■■■□□ 2.54
RANBP2P49792 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
RANBP2P49792 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RANBP2P49792 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.9■■■□□ 2.54
RANBP2P49792 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
RANBP2P49792 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RANBP2P49792 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.87■■■□□ 2.53
RANBP2P49792 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
RANBP2P49792 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RANBP2P49792 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
RANBP2P49792 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.82■■■□□ 2.52
RANBP2P49792 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RANBP2P49792 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.81■■■□□ 2.52
RANBP2P49792 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
RANBP2P49792 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RANBP2P49792 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.8■■■□□ 2.52
RANBP2P49792 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RANBP2P49792 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RANBP2P49792 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.78■■■□□ 2.52
RANBP2P49792 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RANBP2P49792 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RANBP2P49792 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
RANBP2P49792 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RANBP2P49792 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.77■■■□□ 2.52
RANBP2P49792 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.76■■■□□ 2.51
RANBP2P49792 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.75■■■□□ 2.51
RANBP2P49792 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RANBP2P49792 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.73■■■□□ 2.51
RANBP2P49792 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RANBP2P49792 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.71■■■□□ 2.51
RANBP2P49792 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.65■■■□□ 2.5
RANBP2P49792 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RANBP2P49792 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
RANBP2P49792 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.63■■■□□ 2.49
RANBP2P49792 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RANBP2P49792 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.63■■■□□ 2.49
RANBP2P49792 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
RANBP2P49792 MIR3648-2-201ENST00000581792 180 ntBASIC30.62■■■□□ 2.49
RANBP2P49792 MIR3648-1-201ENST00000615959 180 ntBASIC30.62■■■□□ 2.49
RANBP2P49792 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.62■■■□□ 2.49
RANBP2P49792 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.61■■■□□ 2.49
RANBP2P49792 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RANBP2P49792 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.6■■■□□ 2.49
RANBP2P49792 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
RANBP2P49792 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.59■■■□□ 2.49
RANBP2P49792 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms