Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.52■■■□□ 2.64
SYN1P17600 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
SYN1P17600 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
SYN1P17600 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.49■■■□□ 2.63
SYN1P17600 MIR3665-201ENST00000578708 105 ntBASIC31.47■■■□□ 2.63
SYN1P17600 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.45■■■□□ 2.63
SYN1P17600 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.44■■■□□ 2.62
SYN1P17600 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SYN1P17600 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SYN1P17600 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
SYN1P17600 AC087741.3-201ENST00000624270 1347 ntBASIC31.41■■■□□ 2.62
SYN1P17600 AL133380.1-201ENST00000506013 324 ntBASIC31.39■■■□□ 2.62
SYN1P17600 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.39■■■□□ 2.62
SYN1P17600 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SYN1P17600 AC145285.7-201ENST00000614819 1539 ntBASIC31.38■■■□□ 2.61
SYN1P17600 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.37■■■□□ 2.61
SYN1P17600 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SYN1P17600 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SYN1P17600 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.35■■■□□ 2.61
SYN1P17600 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SYN1P17600 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.33■■■□□ 2.61
SYN1P17600 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SYN1P17600 DUX4L28-201ENST00000623687 678 ntBASIC31.32■■■□□ 2.6
SYN1P17600 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.31■■■□□ 2.6
SYN1P17600 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
SYN1P17600 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SYN1P17600 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
SYN1P17600 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
SYN1P17600 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.27■■■□□ 2.6
SYN1P17600 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.27■■■□□ 2.6
SYN1P17600 AC044849.2-201ENST00000606596 710 ntBASIC31.25■■■□□ 2.59
SYN1P17600 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
SYN1P17600 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.22■■■□□ 2.59
SYN1P17600 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.21■■■□□ 2.59
SYN1P17600 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.21■■■□□ 2.59
SYN1P17600 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.2■■■□□ 2.58
SYN1P17600 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.19■■■□□ 2.58
SYN1P17600 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SYN1P17600 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
SYN1P17600 ZNRF2P2-203ENST00000454624 420 ntBASIC31.15■■■□□ 2.58
SYN1P17600 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.15■■■□□ 2.58
SYN1P17600 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SYN1P17600 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SYN1P17600 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
SYN1P17600 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.13■■■□□ 2.57
SYN1P17600 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.12■■■□□ 2.57
SYN1P17600 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.11■■■□□ 2.57
SYN1P17600 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.11■■■□□ 2.57
SYN1P17600 MIR762-201ENST00000390236 83 ntBASIC31.1■■■□□ 2.57
SYN1P17600 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.09■■■□□ 2.57
SYN1P17600 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SYN1P17600 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.07■■■□□ 2.56
SYN1P17600 AC005559.1-201ENST00000589661 871 ntBASIC31.07■■■□□ 2.56
SYN1P17600 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SYN1P17600 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.06■■■□□ 2.56
SYN1P17600 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.06■■■□□ 2.56
SYN1P17600 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
SYN1P17600 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SYN1P17600 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31■■■□□ 2.55
SYN1P17600 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SYN1P17600 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
SYN1P17600 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SYN1P17600 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SYN1P17600 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
SYN1P17600 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.97■■■□□ 2.55
SYN1P17600 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SYN1P17600 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.96■■■□□ 2.55
SYN1P17600 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SYN1P17600 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.95■■■□□ 2.55
SYN1P17600 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.95■■■□□ 2.54
SYN1P17600 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SYN1P17600 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.92■■■□□ 2.54
SYN1P17600 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SYN1P17600 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.91■■■□□ 2.54
SYN1P17600 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SYN1P17600 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SYN1P17600 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.88■■■□□ 2.53
SYN1P17600 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.88■■■□□ 2.53
SYN1P17600 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SYN1P17600 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SYN1P17600 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
SYN1P17600 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.83■■■□□ 2.53
SYN1P17600 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SYN1P17600 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.82■■■□□ 2.52
SYN1P17600 MIR4449-201ENST00000578365 66 ntBASIC30.82■■■□□ 2.52
SYN1P17600 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
SYN1P17600 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
SYN1P17600 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SYN1P17600 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.75■■■□□ 2.51
SYN1P17600 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.75■■■□□ 2.51
SYN1P17600 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
SYN1P17600 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SYN1P17600 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SYN1P17600 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SYN1P17600 MIR639-201ENST00000384974 98 ntBASIC30.67■■■□□ 2.5
SYN1P17600 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.66■■■□□ 2.5
SYN1P17600 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SYN1P17600 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SYN1P17600 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.63■■■□□ 2.49
SYN1P17600 DUX4L29-201ENST00000425409 679 ntBASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms