Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HIST1H1CP16403 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HIST1H1CP16403 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
HIST1H1CP16403 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HIST1H1CP16403 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.94■■□□□ 1.58
HIST1H1CP16403 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HIST1H1CP16403 ZNRF2P1-201ENST00000441407 443 ntBASIC24.94■■□□□ 1.58
HIST1H1CP16403 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HIST1H1CP16403 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.94■■□□□ 1.58
HIST1H1CP16403 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.93■■□□□ 1.58
HIST1H1CP16403 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
HIST1H1CP16403 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HIST1H1CP16403 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
HIST1H1CP16403 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.93■■□□□ 1.58
HIST1H1CP16403 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HIST1H1CP16403 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HIST1H1CP16403 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HIST1H1CP16403 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
HIST1H1CP16403 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HIST1H1CP16403 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HIST1H1CP16403 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HIST1H1CP16403 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.89■■□□□ 1.58
HIST1H1CP16403 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
HIST1H1CP16403 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
HIST1H1CP16403 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HIST1H1CP16403 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.88■■□□□ 1.57
HIST1H1CP16403 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.87■■□□□ 1.57
HIST1H1CP16403 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
HIST1H1CP16403 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
HIST1H1CP16403 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HIST1H1CP16403 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HIST1H1CP16403 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
HIST1H1CP16403 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
HIST1H1CP16403 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HIST1H1CP16403 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.83■■□□□ 1.57
HIST1H1CP16403 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HIST1H1CP16403 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.8■■□□□ 1.56
HIST1H1CP16403 AC120057.4-201ENST00000624722 1615 ntBASIC24.79■■□□□ 1.56
HIST1H1CP16403 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC24.78■■□□□ 1.56
HIST1H1CP16403 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.78■■□□□ 1.56
HIST1H1CP16403 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.76■■□□□ 1.55
HIST1H1CP16403 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
HIST1H1CP16403 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HIST1H1CP16403 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
HIST1H1CP16403 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
HIST1H1CP16403 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HIST1H1CP16403 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.75■■□□□ 1.55
HIST1H1CP16403 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.73■■□□□ 1.55
HIST1H1CP16403 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
HIST1H1CP16403 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.7■■□□□ 1.54
HIST1H1CP16403 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
HIST1H1CP16403 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
HIST1H1CP16403 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HIST1H1CP16403 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.65■■□□□ 1.54
HIST1H1CP16403 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
HIST1H1CP16403 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.64■■□□□ 1.54
HIST1H1CP16403 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HIST1H1CP16403 DYNLL1-208ENST00000550178 581 ntBASIC24.64■■□□□ 1.54
HIST1H1CP16403 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HIST1H1CP16403 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HIST1H1CP16403 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
HIST1H1CP16403 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HIST1H1CP16403 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
HIST1H1CP16403 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.6■■□□□ 1.53
HIST1H1CP16403 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
HIST1H1CP16403 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
HIST1H1CP16403 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.56■■□□□ 1.52
HIST1H1CP16403 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
HIST1H1CP16403 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HIST1H1CP16403 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
HIST1H1CP16403 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HIST1H1CP16403 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HIST1H1CP16403 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HIST1H1CP16403 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HIST1H1CP16403 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.53■■□□□ 1.52
HIST1H1CP16403 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.53■■□□□ 1.52
HIST1H1CP16403 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HIST1H1CP16403 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.52■■□□□ 1.52
HIST1H1CP16403 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.49■■□□□ 1.51
HIST1H1CP16403 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HIST1H1CP16403 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HIST1H1CP16403 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HIST1H1CP16403 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.48■■□□□ 1.51
HIST1H1CP16403 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
HIST1H1CP16403 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HIST1H1CP16403 AL031258.1-201ENST00000623562 325 ntBASIC24.48■■□□□ 1.51
HIST1H1CP16403 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
HIST1H1CP16403 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HIST1H1CP16403 ABCB10P1-201ENST00000614297 2181 ntBASIC24.45■■□□□ 1.5
HIST1H1CP16403 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HIST1H1CP16403 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HIST1H1CP16403 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.44■■□□□ 1.5
HIST1H1CP16403 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HIST1H1CP16403 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
HIST1H1CP16403 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HIST1H1CP16403 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HIST1H1CP16403 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HIST1H1CP16403 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
HIST1H1CP16403 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HIST1H1CP16403 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms