Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL11A1P12107 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL11A1P12107 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
COL11A1P12107 RPS2P35-201ENST00000443417 897 ntBASIC32.35■■■□□ 2.77
COL11A1P12107 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
COL11A1P12107 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
COL11A1P12107 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
COL11A1P12107 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.33■■■□□ 2.77
COL11A1P12107 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
COL11A1P12107 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
COL11A1P12107 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.32■■■□□ 2.76
COL11A1P12107 AL391121.1-201ENST00000607967 1349 ntBASIC32.32■■■□□ 2.76
COL11A1P12107 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.32■■■□□ 2.76
COL11A1P12107 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COL11A1P12107 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
COL11A1P12107 CAHM-201ENST00000604200 896 ntBASIC32.3■■■□□ 2.76
COL11A1P12107 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.3■■■□□ 2.76
COL11A1P12107 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
COL11A1P12107 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
COL11A1P12107 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
COL11A1P12107 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
COL11A1P12107 AL162393.1-201ENST00000437852 946 ntBASIC32.28■■■□□ 2.76
COL11A1P12107 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
COL11A1P12107 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
COL11A1P12107 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.24■■■□□ 2.75
COL11A1P12107 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
COL11A1P12107 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
COL11A1P12107 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
COL11A1P12107 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
COL11A1P12107 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
COL11A1P12107 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.16■■■□□ 2.74
COL11A1P12107 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
COL11A1P12107 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.12■■■□□ 2.73
COL11A1P12107 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
COL11A1P12107 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.1■■■□□ 2.73
COL11A1P12107 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.08■■■□□ 2.73
COL11A1P12107 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.07■■■□□ 2.73
COL11A1P12107 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
COL11A1P12107 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.06■■■□□ 2.72
COL11A1P12107 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
COL11A1P12107 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
COL11A1P12107 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.01■■■□□ 2.72
COL11A1P12107 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
COL11A1P12107 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.93■■■□□ 2.7
COL11A1P12107 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL11A1P12107 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COL11A1P12107 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.9■■■□□ 2.7
COL11A1P12107 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
COL11A1P12107 DUX4L28-201ENST00000623687 678 ntBASIC31.89■■■□□ 2.69
COL11A1P12107 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
COL11A1P12107 AP006261.1-201ENST00000584783 668 ntBASIC31.88■■■□□ 2.69
COL11A1P12107 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
COL11A1P12107 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
COL11A1P12107 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL11A1P12107 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
COL11A1P12107 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
COL11A1P12107 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
COL11A1P12107 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.82■■■□□ 2.68
COL11A1P12107 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
COL11A1P12107 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
COL11A1P12107 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.79■■■□□ 2.68
COL11A1P12107 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.79■■■□□ 2.68
COL11A1P12107 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
COL11A1P12107 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.79■■■□□ 2.68
COL11A1P12107 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
COL11A1P12107 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
COL11A1P12107 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
COL11A1P12107 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
COL11A1P12107 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
COL11A1P12107 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.75■■■□□ 2.67
COL11A1P12107 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL11A1P12107 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL11A1P12107 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
COL11A1P12107 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
COL11A1P12107 AC005559.1-201ENST00000589661 871 ntBASIC31.74■■■□□ 2.67
COL11A1P12107 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.74■■■□□ 2.67
COL11A1P12107 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.73■■■□□ 2.67
COL11A1P12107 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
COL11A1P12107 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.72■■■□□ 2.67
COL11A1P12107 MIR3665-201ENST00000578708 105 ntBASIC31.72■■■□□ 2.67
COL11A1P12107 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
COL11A1P12107 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
COL11A1P12107 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
COL11A1P12107 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
COL11A1P12107 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL11A1P12107 MIR762-201ENST00000390236 83 ntBASIC31.68■■■□□ 2.66
COL11A1P12107 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.68■■■□□ 2.66
COL11A1P12107 AC087741.3-201ENST00000624270 1347 ntBASIC31.68■■■□□ 2.66
COL11A1P12107 AC044849.2-201ENST00000606596 710 ntBASIC31.68■■■□□ 2.66
COL11A1P12107 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.67■■■□□ 2.66
COL11A1P12107 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.66■■■□□ 2.66
COL11A1P12107 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
COL11A1P12107 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.64■■■□□ 2.66
COL11A1P12107 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
COL11A1P12107 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.64■■■□□ 2.66
COL11A1P12107 WASH5P-204ENST00000632292 975 ntBASIC31.63■■■□□ 2.65
COL11A1P12107 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.61■■■□□ 2.65
COL11A1P12107 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
COL11A1P12107 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
COL11A1P12107 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms