Protein–RNA interactions for Protein: O95180

CACNA1H, Voltage-dependent T-type calcium channel subunit alpha-1H, humanhuman

Predictions only

Length 2,353 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1HO95180 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
CACNA1HO95180 AC087741.3-201ENST00000624270 1347 ntBASIC28.8■■■□□ 2.2
CACNA1HO95180 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.78■■■□□ 2.2
CACNA1HO95180 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.74■■■□□ 2.19
CACNA1HO95180 AC044849.2-201ENST00000606596 710 ntBASIC28.74■■■□□ 2.19
CACNA1HO95180 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CACNA1HO95180 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.72■■■□□ 2.19
CACNA1HO95180 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CACNA1HO95180 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.71■■■□□ 2.19
CACNA1HO95180 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CACNA1HO95180 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.69■■■□□ 2.18
CACNA1HO95180 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.69■■■□□ 2.18
CACNA1HO95180 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
CACNA1HO95180 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.67■■■□□ 2.18
CACNA1HO95180 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CACNA1HO95180 MIR4449-201ENST00000578365 66 ntBASIC28.65■■■□□ 2.18
CACNA1HO95180 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.65■■■□□ 2.18
CACNA1HO95180 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.64■■■□□ 2.18
CACNA1HO95180 DUX4L28-201ENST00000623687 678 ntBASIC28.64■■■□□ 2.17
CACNA1HO95180 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.63■■■□□ 2.17
CACNA1HO95180 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.6■■■□□ 2.17
CACNA1HO95180 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.6■■■□□ 2.17
CACNA1HO95180 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
CACNA1HO95180 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
CACNA1HO95180 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CACNA1HO95180 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.58■■■□□ 2.17
CACNA1HO95180 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.58■■■□□ 2.17
CACNA1HO95180 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
CACNA1HO95180 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
CACNA1HO95180 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CACNA1HO95180 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
CACNA1HO95180 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CACNA1HO95180 AL133380.1-201ENST00000506013 324 ntBASIC28.52■■■□□ 2.16
CACNA1HO95180 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.52■■■□□ 2.16
CACNA1HO95180 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CACNA1HO95180 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CACNA1HO95180 MIR762-201ENST00000390236 83 ntBASIC28.47■■■□□ 2.15
CACNA1HO95180 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.47■■■□□ 2.15
CACNA1HO95180 AC145285.7-201ENST00000614819 1539 ntBASIC28.46■■■□□ 2.15
CACNA1HO95180 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.44■■■□□ 2.14
CACNA1HO95180 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CACNA1HO95180 AC005559.1-201ENST00000589661 871 ntBASIC28.42■■■□□ 2.14
CACNA1HO95180 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
CACNA1HO95180 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.39■■■□□ 2.14
CACNA1HO95180 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CACNA1HO95180 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.38■■■□□ 2.13
CACNA1HO95180 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CACNA1HO95180 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
CACNA1HO95180 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CACNA1HO95180 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.38■■■□□ 2.13
CACNA1HO95180 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.38■■■□□ 2.13
CACNA1HO95180 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.37■■■□□ 2.13
CACNA1HO95180 HSD17B1P1-201ENST00000590052 955 ntBASIC28.37■■■□□ 2.13
CACNA1HO95180 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.34■■■□□ 2.13
CACNA1HO95180 ZNRF2P2-203ENST00000454624 420 ntBASIC28.33■■■□□ 2.13
CACNA1HO95180 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.33■■■□□ 2.13
CACNA1HO95180 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.33■■■□□ 2.13
CACNA1HO95180 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CACNA1HO95180 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
CACNA1HO95180 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.32■■■□□ 2.12
CACNA1HO95180 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
CACNA1HO95180 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CACNA1HO95180 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CACNA1HO95180 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
CACNA1HO95180 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CACNA1HO95180 MIR639-201ENST00000384974 98 ntBASIC28.28■■■□□ 2.12
CACNA1HO95180 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CACNA1HO95180 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.27■■■□□ 2.12
CACNA1HO95180 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
CACNA1HO95180 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.26■■■□□ 2.11
CACNA1HO95180 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CACNA1HO95180 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CACNA1HO95180 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CACNA1HO95180 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CACNA1HO95180 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CACNA1HO95180 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CACNA1HO95180 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
CACNA1HO95180 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
CACNA1HO95180 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.19■■■□□ 2.1
CACNA1HO95180 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.18■■■□□ 2.1
CACNA1HO95180 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.17■■■□□ 2.1
CACNA1HO95180 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.17■■■□□ 2.1
CACNA1HO95180 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.16■■■□□ 2.1
CACNA1HO95180 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.16■■■□□ 2.1
CACNA1HO95180 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.15■■■□□ 2.1
CACNA1HO95180 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.13■■■□□ 2.09
CACNA1HO95180 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CACNA1HO95180 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CACNA1HO95180 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CACNA1HO95180 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CACNA1HO95180 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.05■■■□□ 2.08
CACNA1HO95180 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CACNA1HO95180 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.04■■■□□ 2.08
CACNA1HO95180 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CACNA1HO95180 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CACNA1HO95180 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CACNA1HO95180 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.02■■■□□ 2.08
CACNA1HO95180 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.02■■■□□ 2.08
CACNA1HO95180 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.02■■■□□ 2.08
CACNA1HO95180 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms