Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RFPL3O75679 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFPL3O75679 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RFPL3O75679 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.33■■□□□ 1.97
RFPL3O75679 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.32■■□□□ 1.96
RFPL3O75679 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.32■■□□□ 1.96
RFPL3O75679 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFPL3O75679 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RFPL3O75679 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.31■■□□□ 1.96
RFPL3O75679 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RFPL3O75679 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
RFPL3O75679 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFPL3O75679 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RFPL3O75679 AL133380.1-201ENST00000506013 324 ntBASIC27.27■■□□□ 1.96
RFPL3O75679 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
RFPL3O75679 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
RFPL3O75679 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.23■■□□□ 1.95
RFPL3O75679 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
RFPL3O75679 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.22■■□□□ 1.95
RFPL3O75679 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RFPL3O75679 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RFPL3O75679 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
RFPL3O75679 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.2■■□□□ 1.94
RFPL3O75679 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RFPL3O75679 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.15■■□□□ 1.94
RFPL3O75679 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.15■■□□□ 1.94
RFPL3O75679 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RFPL3O75679 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.14■■□□□ 1.94
RFPL3O75679 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
RFPL3O75679 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RFPL3O75679 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RFPL3O75679 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.11■■□□□ 1.93
RFPL3O75679 MIR3665-201ENST00000578708 105 ntBASIC27.11■■□□□ 1.93
RFPL3O75679 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.11■■□□□ 1.93
RFPL3O75679 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.1■■□□□ 1.93
RFPL3O75679 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RFPL3O75679 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RFPL3O75679 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
RFPL3O75679 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.08■■□□□ 1.93
RFPL3O75679 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RFPL3O75679 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.07■■□□□ 1.92
RFPL3O75679 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.06■■□□□ 1.92
RFPL3O75679 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RFPL3O75679 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RFPL3O75679 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RFPL3O75679 ABHD17AP4-201ENST00000411545 909 ntBASIC27.01■■□□□ 1.91
RFPL3O75679 MIR7108-201ENST00000614319 87 ntBASIC27■■□□□ 1.91
RFPL3O75679 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RFPL3O75679 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
RFPL3O75679 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RFPL3O75679 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.96■■□□□ 1.91
RFPL3O75679 AC087741.3-201ENST00000624270 1347 ntBASIC26.95■■□□□ 1.91
RFPL3O75679 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
RFPL3O75679 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFPL3O75679 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.95■■□□□ 1.9
RFPL3O75679 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.94■■□□□ 1.9
RFPL3O75679 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RFPL3O75679 DUX4L28-201ENST00000623687 678 ntBASIC26.93■■□□□ 1.9
RFPL3O75679 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.92■■□□□ 1.9
RFPL3O75679 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RFPL3O75679 AC044849.2-201ENST00000606596 710 ntBASIC26.9■■□□□ 1.9
RFPL3O75679 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RFPL3O75679 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFPL3O75679 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.89■■□□□ 1.9
RFPL3O75679 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.89■■□□□ 1.89
RFPL3O75679 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFPL3O75679 MIR762-201ENST00000390236 83 ntBASIC26.88■■□□□ 1.89
RFPL3O75679 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.87■■□□□ 1.89
RFPL3O75679 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.86■■□□□ 1.89
RFPL3O75679 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RFPL3O75679 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RFPL3O75679 AC005559.1-201ENST00000589661 871 ntBASIC26.85■■□□□ 1.89
RFPL3O75679 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RFPL3O75679 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.84■■□□□ 1.89
RFPL3O75679 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RFPL3O75679 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.82■■□□□ 1.88
RFPL3O75679 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RFPL3O75679 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
RFPL3O75679 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFPL3O75679 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFPL3O75679 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.79■■□□□ 1.88
RFPL3O75679 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.79■■□□□ 1.88
RFPL3O75679 HLA-V-202ENST00000446817 847 ntBASIC26.75■■□□□ 1.87
RFPL3O75679 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.75■■□□□ 1.87
RFPL3O75679 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.74■■□□□ 1.87
RFPL3O75679 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RFPL3O75679 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFPL3O75679 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.73■■□□□ 1.87
RFPL3O75679 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.73■■□□□ 1.87
RFPL3O75679 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RFPL3O75679 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
RFPL3O75679 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
RFPL3O75679 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
RFPL3O75679 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.72■■□□□ 1.87
RFPL3O75679 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RFPL3O75679 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFPL3O75679 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
RFPL3O75679 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RFPL3O75679 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RFPL3O75679 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms