Protein–RNA interactions for Protein: O60784

TOM1, Target of Myb protein 1, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1O60784 AC087741.3-201ENST00000624270 1347 ntBASIC40.42■■■■■ 4.06
TOM1O60784 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC40.42■■■■■ 4.06
TOM1O60784 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC40.41■■■■■ 4.06
TOM1O60784 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC40.4■■■■■ 4.06
TOM1O60784 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC40.4■■■■■ 4.06
TOM1O60784 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC40.39■■■■■ 4.06
TOM1O60784 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC40.34■■■■■ 4.05
TOM1O60784 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC40.34■■■■■ 4.05
TOM1O60784 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC40.33■■■■■ 4.05
TOM1O60784 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC40.3■■■■■ 4.04
TOM1O60784 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC40.3■■■■■ 4.04
TOM1O60784 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC40.3■■■■■ 4.04
TOM1O60784 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC40.3■■■■■ 4.04
TOM1O60784 AC044849.2-201ENST00000606596 710 ntBASIC40.28■■■■■ 4.04
TOM1O60784 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC40.26■■■■■ 4.04
TOM1O60784 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC40.24■■■■■ 4.03
TOM1O60784 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC40.22■■■■■ 4.03
TOM1O60784 DUX4L28-201ENST00000623687 678 ntBASIC40.19■■■■■ 4.02
TOM1O60784 ZNRF2P2-203ENST00000454624 420 ntBASIC40.18■■■■■ 4.02
TOM1O60784 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC40.18■■■■■ 4.02
TOM1O60784 EBPL-202ENST00000378268 680 ntTSL 3 BASIC40.14■■■■■ 4.02
TOM1O60784 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC40.14■■■■■ 4.02
TOM1O60784 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC40.13■■■■■ 4.01
TOM1O60784 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
TOM1O60784 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC40.11■■■■■ 4.01
TOM1O60784 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC40.09■■■■■ 4.01
TOM1O60784 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC40.09■■■■■ 4.01
TOM1O60784 AL133380.1-201ENST00000506013 324 ntBASIC40.08■■■■■ 4.01
TOM1O60784 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4.01
TOM1O60784 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC40.06■■■■■ 4
TOM1O60784 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
TOM1O60784 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC40.02■■■■■ 4
TOM1O60784 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC40.02■■■■■ 4
TOM1O60784 MIR4449-201ENST00000578365 66 ntBASIC40■■■■□ 3.99
TOM1O60784 CHML-205ENST00000638160 705 ntTSL 3 BASIC39.97■■■■□ 3.99
TOM1O60784 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
TOM1O60784 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC39.97■■■■□ 3.99
TOM1O60784 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC39.96■■■■□ 3.99
TOM1O60784 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
TOM1O60784 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC39.95■■■■□ 3.99
TOM1O60784 RPS2-202ENST00000526522 924 ntTSL 2 BASIC39.93■■■■□ 3.98
TOM1O60784 MVK-208ENST00000539696 608 ntTSL 5 BASIC39.9■■■■□ 3.98
TOM1O60784 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC39.87■■■■□ 3.97
TOM1O60784 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
TOM1O60784 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
TOM1O60784 AC005559.1-201ENST00000589661 871 ntBASIC39.85■■■■□ 3.97
TOM1O60784 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
TOM1O60784 MIR762-201ENST00000390236 83 ntBASIC39.84■■■■□ 3.97
TOM1O60784 BOD1-206ENST00000480951 814 ntTSL 2 BASIC39.84■■■■□ 3.97
TOM1O60784 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.84■■■■□ 3.97
TOM1O60784 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC39.8■■■■□ 3.96
TOM1O60784 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC39.79■■■■□ 3.96
TOM1O60784 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.78■■■■□ 3.96
TOM1O60784 HGH1-207ENST00000628266 258 ntTSL 5 BASIC39.73■■■■□ 3.95
TOM1O60784 MIR639-201ENST00000384974 98 ntBASIC39.72■■■■□ 3.95
TOM1O60784 HSD17B1P1-201ENST00000590052 955 ntBASIC39.72■■■■□ 3.95
TOM1O60784 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
TOM1O60784 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
TOM1O60784 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
TOM1O60784 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
TOM1O60784 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
TOM1O60784 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
TOM1O60784 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC39.64■■■■□ 3.94
TOM1O60784 BRD4-212ENST00000630599 726 ntTSL 2 BASIC39.63■■■■□ 3.93
TOM1O60784 AC145285.7-201ENST00000614819 1539 ntBASIC39.63■■■■□ 3.93
TOM1O60784 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC39.62■■■■□ 3.93
TOM1O60784 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
TOM1O60784 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
TOM1O60784 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
TOM1O60784 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
TOM1O60784 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC39.57■■■■□ 3.93
TOM1O60784 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC39.57■■■■□ 3.92
TOM1O60784 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
TOM1O60784 CALM3-209ENST00000597743 577 ntTSL 4 BASIC39.56■■■■□ 3.92
TOM1O60784 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC39.52■■■■□ 3.92
TOM1O60784 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC39.51■■■■□ 3.92
TOM1O60784 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
TOM1O60784 MACF1-219ENST00000484793 834 ntTSL 2 BASIC39.49■■■■□ 3.91
TOM1O60784 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
TOM1O60784 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
TOM1O60784 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC39.46■■■■□ 3.91
TOM1O60784 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.45■■■■□ 3.91
TOM1O60784 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC39.44■■■■□ 3.9
TOM1O60784 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
TOM1O60784 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC39.43■■■■□ 3.9
TOM1O60784 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC39.43■■■■□ 3.9
TOM1O60784 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC39.39■■■■□ 3.9
TOM1O60784 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC39.39■■■■□ 3.9
TOM1O60784 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC39.37■■■■□ 3.89
TOM1O60784 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC39.36■■■■□ 3.89
TOM1O60784 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC39.34■■■■□ 3.89
TOM1O60784 DUX4L29-201ENST00000425409 679 ntBASIC39.34■■■■□ 3.89
TOM1O60784 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC39.33■■■■□ 3.89
TOM1O60784 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC39.32■■■■□ 3.89
TOM1O60784 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.31■■■■□ 3.88
TOM1O60784 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
TOM1O60784 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
TOM1O60784 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39.25■■■■□ 3.87
TOM1O60784 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC39.24■■■■□ 3.87
TOM1O60784 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC39.24■■■■□ 3.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms