Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HCN1O60741 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
HCN1O60741 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
HCN1O60741 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
HCN1O60741 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
HCN1O60741 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HCN1O60741 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
HCN1O60741 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.67■■□□□ 1.7
HCN1O60741 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.67■■□□□ 1.7
HCN1O60741 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
HCN1O60741 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HCN1O60741 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
HCN1O60741 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HCN1O60741 RARRES2P7-201ENST00000567349 469 ntBASIC25.65■■□□□ 1.7
HCN1O60741 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HCN1O60741 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
HCN1O60741 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
HCN1O60741 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.61■■□□□ 1.69
HCN1O60741 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
HCN1O60741 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HCN1O60741 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.58■■□□□ 1.69
HCN1O60741 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HCN1O60741 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.58■■□□□ 1.69
HCN1O60741 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
HCN1O60741 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
HCN1O60741 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HCN1O60741 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.57■■□□□ 1.68
HCN1O60741 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HCN1O60741 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.55■■□□□ 1.68
HCN1O60741 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HCN1O60741 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.54■■□□□ 1.68
HCN1O60741 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HCN1O60741 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HCN1O60741 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.52■■□□□ 1.68
HCN1O60741 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HCN1O60741 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.51■■□□□ 1.67
HCN1O60741 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HCN1O60741 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
HCN1O60741 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
HCN1O60741 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HCN1O60741 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HCN1O60741 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HCN1O60741 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
HCN1O60741 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
HCN1O60741 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.46■■□□□ 1.67
HCN1O60741 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.46■■□□□ 1.67
HCN1O60741 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HCN1O60741 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.44■■□□□ 1.66
HCN1O60741 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
HCN1O60741 SETD8P1-201ENST00000623146 1180 ntBASIC25.44■■□□□ 1.66
HCN1O60741 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
HCN1O60741 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.42■■□□□ 1.66
HCN1O60741 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.42■■□□□ 1.66
HCN1O60741 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HCN1O60741 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HCN1O60741 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HCN1O60741 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HCN1O60741 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.39■■□□□ 1.66
HCN1O60741 AC097358.2-201ENST00000607541 1159 ntBASIC25.39■■□□□ 1.66
HCN1O60741 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.39■■□□□ 1.65
HCN1O60741 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.38■■□□□ 1.65
HCN1O60741 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
HCN1O60741 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCN1O60741 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
HCN1O60741 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCN1O60741 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCN1O60741 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
HCN1O60741 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HCN1O60741 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
HCN1O60741 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HCN1O60741 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HCN1O60741 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.33■■□□□ 1.65
HCN1O60741 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HCN1O60741 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HCN1O60741 AC136428.2-201ENST00000563187 214 ntBASIC25.31■■□□□ 1.64
HCN1O60741 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.31■■□□□ 1.64
HCN1O60741 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HCN1O60741 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.29■■□□□ 1.64
HCN1O60741 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HCN1O60741 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.26■■□□□ 1.63
HCN1O60741 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HCN1O60741 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.24■■□□□ 1.63
HCN1O60741 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HCN1O60741 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HCN1O60741 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HCN1O60741 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
HCN1O60741 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.22■■□□□ 1.63
HCN1O60741 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.22■■□□□ 1.63
HCN1O60741 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
HCN1O60741 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HCN1O60741 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.2■■□□□ 1.62
HCN1O60741 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
HCN1O60741 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.19■■□□□ 1.62
HCN1O60741 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
HCN1O60741 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HCN1O60741 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HCN1O60741 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HCN1O60741 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
HCN1O60741 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HCN1O60741 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms